Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNA5SP441-201ENST00000516809 88 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC28A1O00337 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC28A1O00337 AC084033.1-201ENST00000550830 633 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC28A1O00337 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC28A1O00337 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC28A1O00337 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 AC125494.2-201ENST00000602431 657 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC28A1O00337 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC28A1O00337 AL021918.2-201ENST00000613415 194 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 AL139099.4-201ENST00000614802 114 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 AC096708.4-201ENST00000620563 552 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 AL109924.4-201ENST00000623089 670 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC28A1O00337 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 FBXL21-201ENST00000297158 1305 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC28A1O00337 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC28A1O00337 CAP1P2-201ENST00000417455 1409 ntBASIC5.64□□□□□ -1.51
SLC28A1O00337 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC28A1O00337 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC28A1O00337 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC28A1O00337 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC28A1O00337 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
SLC28A1O00337 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 RN7SKP184-201ENST00000362348 333 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 RNA5SP453-201ENST00000362503 119 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 AC087752.1-201ENST00000391360 558 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 YWHAZP6-201ENST00000399764 738 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC28A1O00337 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 RNGTTP1-201ENST00000420965 728 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 KIF4CP-201ENST00000422742 1279 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AL353662.1-201ENST00000439099 327 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 AC015983.1-201ENST00000441577 373 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 BMS1P10-201ENST00000443754 1120 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 OR7E157P-201ENST00000494376 911 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SLC28A1O00337 HIRAP1-201ENST00000605318 787 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC28A1O00337 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
SLC28A1O00337 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC28A1O00337 AC140479.2-201ENST00000421567 3130 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 HSPD1P9-201ENST00000420325 1636 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 MFSD8-239ENST00000641590 2479 ntBASIC5.63□□□□□ -1.51
SLC28A1O00337 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 GTF2IP4-201ENST00000453092 2054 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AL034546.1-201ENST00000623740 3693 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC28A1O00337 MIR191-201ENST00000384873 92 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 RNA5SP91-201ENST00000390902 119 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC007068.1-201ENST00000396690 844 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 RN7SKP146-201ENST00000410242 334 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 RPSAP32-201ENST00000432681 526 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC242426.1-201ENST00000435270 960 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 MEMO1P4-201ENST00000453590 386 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC004129.2-201ENST00000457229 287 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 RN7SL269P-201ENST00000467795 305 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 DEFB109A-201ENST00000482450 265 ntBASIC5.62□□□□□ -1.51
SLC28A1O00337 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC28A1O00337 AC025857.1-201ENST00000525252 377 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms