Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC005017.1-201ENST00000482002 490 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SL284P-201ENST00000498823 275 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC025768.1-201ENST00000510057 267 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 KCTD9P6-201ENST00000522306 950 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC007346.1-201ENST00000569208 867 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 GARSP1-201ENST00000570895 719 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 TXNP4-201ENST00000575018 310 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 OR1E3-201ENST00000575608 948 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 BNIP3P39-201ENST00000601077 554 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 BNIP3P35-201ENST00000604530 490 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL133481.2-203ENST00000607558 139 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL021918.2-201ENST00000613415 194 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AC022400.9-201ENST00000623633 273 ntBASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV7S3A2A0A539 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AP002833.3-201ENST00000625075 2265 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC027279.4-201ENST00000624371 2072 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC004014.2-201ENST00000623718 5122 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC083899.2-201ENST00000423285 1376 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 RNA5SP279-201ENST00000365513 117 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 RN7SKP17-201ENST00000411242 351 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 MTND2P15-201ENST00000418575 892 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 RPS4XP5-201ENST00000419038 768 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 FAM183DP-201ENST00000421987 399 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 RPL7AP14-201ENST00000424041 802 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC096775.1-201ENST00000437724 448 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL445466.1-201ENST00000448432 357 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL157777.1-201ENST00000468100 304 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC079080.1-201ENST00000479841 822 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC006539.1-201ENST00000481419 501 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AP002453.1-201ENST00000492327 668 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL158068.1-201ENST00000506116 616 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC136777.2-201ENST00000522979 358 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AP005119.1-201ENST00000580956 292 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AL671309.1-201ENST00000603750 544 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 OR11H2-202ENST00000641517 1085 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC140479.2-201ENST00000421567 3130 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC008627.1-201ENST00000517511 1704 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 FBXL21-201ENST00000297158 1305 ntBASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV7S3A2A0A539 GNL2P1-201ENST00000451274 2190 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms