Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
VTA1Q9NP79 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.04□□□□□ -1.28
VTA1Q9NP79 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
VTA1Q9NP79 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 RNA5SP273-201ENST00000362484 113 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AL132875.1-201ENST00000403623 949 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 MTATP6P31-201ENST00000406985 692 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 RN7SKP206-201ENST00000410823 293 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 CDY17P-201ENST00000414121 1282 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AL391987.1-201ENST00000441025 200 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 HMGN1P5-201ENST00000448591 263 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC115223.1-201ENST00000466377 870 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 HAUS1P1-201ENST00000505275 832 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC034244.2-201ENST00000514668 858 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 UBTFL9-201ENST00000534504 1148 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC068305.2-201ENST00000550567 1205 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC018558.5-201ENST00000565840 952 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AC097467.4-201ENST00000605504 141 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 TCP1P3-201ENST00000414406 1498 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 Z83820.1-201ENST00000456978 1499 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.03□□□□□ -1.28
VTA1Q9NP79 AL359715.3-201ENST00000569267 2123 ntBASIC7.03□□□□□ -1.28
VTA1Q9NP79 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
VTA1Q9NP79 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC105235.1-201ENST00000623208 1816 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 RN7SKP69-201ENST00000365390 305 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 SNORD65-201ENST00000391079 73 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 SNORA17A-201ENST00000391185 133 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 VN1R51P-201ENST00000411675 945 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC245096.1-201ENST00000413104 546 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC011242.1-201ENST00000433596 1158 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 MTND2P6-201ENST00000455337 1030 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 VPS25P1-201ENST00000455691 508 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 RANP2-201ENST00000456833 229 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 NXT1P1-201ENST00000458481 316 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 NPM1P29-201ENST00000483112 803 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 MTATP6P1-201ENST00000514057 681 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 RNU6-334P-201ENST00000517072 102 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC022826.1-201ENST00000519383 805 ntBASIC7.02□□□□□ -1.29
VTA1Q9NP79 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.02□□□□□ -1.29
VTA1Q9NP79 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms