Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 RNGTTP1-201ENST00000420965 728 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AL354766.1-201ENST00000423396 542 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC023271.1-201ENST00000445936 1090 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 OR7E116P-201ENST00000448529 957 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 MEMO1P4-201ENST00000453590 386 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC113367.2-201ENST00000505749 160 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 RN7SKP35-201ENST00000517210 151 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC137627.1-201ENST00000545761 289 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC091078.2-201ENST00000557145 559 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 MIR6133-201ENST00000617057 108 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 AL022311.1-201ENST00000623726 19416 ntBASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HDHD3Q9BSH5 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 ABCC13-202ENST00000463099 3842 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AP000432.2-201ENST00000624164 2048 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC117409.1-201ENST00000470499 1310 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MIR130A-201ENST00000385274 89 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 DEFA9P-201ENST00000433042 285 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 GAPDHP75-201ENST00000433910 943 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AL590399.4-201ENST00000436561 601 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RBMY2AP-201ENST00000445405 1157 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RBMY2CP-201ENST00000448575 1157 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RBMY2DP-202ENST00000448881 1157 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RN7SL254P-201ENST00000460609 284 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RN7SL197P-201ENST00000466981 299 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RPSAP51-201ENST00000497462 645 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC112484.3-201ENST00000505910 329 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RN7SKP238-201ENST00000516483 249 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC139697.1-201ENST00000548429 745 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MIR6809-201ENST00000612189 116 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC007786.3-201ENST00000615154 596 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC007938.2-201ENST00000604666 2634 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 AC016745.2-201ENST00000608834 3443 ntBASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.82□□□□□ -1.64
HDHD3Q9BSH5 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms