Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 AL133388.1-201ENST00000404509 287 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 AC068138.1-201ENST00000412635 217 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 AL590139.1-201ENST00000416267 400 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.42□□□□□ -1.22
ABCA3Q99758 RPL7P56-201ENST00000429441 717 ntBASIC7.42□□□□□ -1.22
ABCA3Q99758 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC7.42□□□□□ -1.22
ABCA3Q99758 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
ABCA3Q99758 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.42□□□□□ -1.22
ABCA3Q99758 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.42□□□□□ -1.22
ABCA3Q99758 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ABCA3Q99758 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.41□□□□□ -1.22
ABCA3Q99758 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 RNA5SP487-201ENST00000410186 122 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 RPSAP35-201ENST00000413753 818 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.41□□□□□ -1.22
ABCA3Q99758 RPS29P33-201ENST00000456717 146 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AC068522.1-201ENST00000482895 345 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC7.41□□□□□ -1.22
ABCA3Q99758 RN7SKP147-201ENST00000517154 244 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 PCNPP1-201ENST00000552501 511 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.41□□□□□ -1.22
ABCA3Q99758 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.41□□□□□ -1.22
ABCA3Q99758 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 AL449283.1-201ENST00000602631 3403 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.41□□□□□ -1.22
ABCA3Q99758 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 AP002991.2-201ENST00000623807 2801 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.41□□□□□ -1.22
ABCA3Q99758 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
ABCA3Q99758 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ABCA3Q99758 RNU1-146P-201ENST00000364015 165 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 MIR551A-201ENST00000385042 96 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.41□□□□□ -1.22
ABCA3Q99758 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.41□□□□□ -1.22
ABCA3Q99758 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.41□□□□□ -1.22
ABCA3Q99758 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AC092490.3-201ENST00000545370 572 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.41□□□□□ -1.22
ABCA3Q99758 AC009117.1-201ENST00000563948 554 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AL353662.3-201ENST00000625131 237 ntBASIC7.41□□□□□ -1.22
ABCA3Q99758 AP000866.6-201ENST00000638898 3579 ntBASIC7.4□□□□□ -1.22
ABCA3Q99758 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
ABCA3Q99758 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.4□□□□□ -1.22
ABCA3Q99758 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.4□□□□□ -1.22
ABCA3Q99758 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
ABCA3Q99758 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ABCA3Q99758 AL162456.1-201ENST00000634535 2006 ntBASIC7.4□□□□□ -1.22
ABCA3Q99758 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 RNA5SP326-201ENST00000363209 110 ntBASIC7.4□□□□□ -1.23
ABCA3Q99758 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
ABCA3Q99758 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.4□□□□□ -1.23
ABCA3Q99758 AC211486.3-201ENST00000412694 621 ntBASIC7.4□□□□□ -1.23
ABCA3Q99758 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.4□□□□□ -1.23
ABCA3Q99758 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC7.4□□□□□ -1.23
ABCA3Q99758 WBP1LP8-201ENST00000617401 327 ntBASIC7.4□□□□□ -1.23
ABCA3Q99758 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
ABCA3Q99758 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
ABCA3Q99758 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
ABCA3Q99758 AC232271.1-201ENST00000602455 2715 ntBASIC7.39□□□□□ -1.23
ABCA3Q99758 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
ABCA3Q99758 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ABCA3Q99758 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
ABCA3Q99758 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms