Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AL445670.1-201ENST00000618889 801 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC241377.1-201ENST00000619797 406 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AL162377.2-201ENST00000624532 337 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 UGT2B24P-201ENST00000514441 1597 ntBASIC6.09□□□□□ -1.43
RPRD1AQ96P16 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.09□□□□□ -1.43
RPRD1AQ96P16 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RPRD1AQ96P16 AC022164.1-201ENST00000568767 2673 ntBASIC6.09□□□□□ -1.44
RPRD1AQ96P16 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RPRD1AQ96P16 AC125336.1-201ENST00000508893 2827 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 PDZK1P1-202ENST00000425209 1350 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 RNA5SP251-201ENST00000410614 137 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 SLC20A1P1-201ENST00000413906 956 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AL603882.1-201ENST00000463059 681 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 SLC25A51P1-201ENST00000468432 871 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC099521.1-201ENST00000482557 334 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AL049779.3-201ENST00000557141 606 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AL356801.1-201ENST00000559320 294 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 ZNF322P1-201ENST00000568013 1209 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 COX6CP7-201ENST00000597056 208 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC145423.1-201ENST00000605712 336 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 NLRP3P1-201ENST00000622303 1785 ntBASIC6.08□□□□□ -1.44
RPRD1AQ96P16 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.08□□□□□ -1.44
RPRD1AQ96P16 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC232271.1-201ENST00000602455 2715 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC116158.1-201ENST00000560231 2129 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC091305.2-201ENST00000624049 1576 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 RNU1-150P-201ENST00000362491 162 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AL096800.1-201ENST00000405326 893 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC084754.1-201ENST00000463466 464 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC090568.1-201ENST00000509499 856 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 IGKV2-4-201ENST00000523070 340 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AP001804.1-201ENST00000526868 919 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 AC100767.2-201ENST00000604840 693 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 SNX18P12-201ENST00000624821 759 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 OR11H2-202ENST00000641517 1085 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 OR8G3P-202ENST00000641572 1255 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 WDR95P-201ENST00000425638 1542 ntBASIC6.07□□□□□ -1.44
RPRD1AQ96P16 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPRD1AQ96P16 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms