Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 AP002800.1-201ENST00000624982 2225 ntBASIC6.5□□□□□ -1.37
NUP43Q8NFH3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 AP005139.1-201ENST00000580702 1647 ntBASIC6.5□□□□□ -1.37
NUP43Q8NFH3 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.5□□□□□ -1.37
NUP43Q8NFH3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 UGT2B24P-201ENST00000514441 1597 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 NXF4-202ENST00000416098 1465 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RNU1-87P-201ENST00000363727 170 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RNU1-24P-201ENST00000364285 165 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL359715.1-201ENST00000404330 555 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC098592.1-201ENST00000419352 333 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL022331.1-201ENST00000429025 477 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RPL14P5-201ENST00000436474 730 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 MTCYBP1-201ENST00000454315 1119 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC026348.1-201ENST00000462549 1053 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC084754.1-201ENST00000463466 464 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RPL5P15-201ENST00000475870 897 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RPL7P41-201ENST00000485823 957 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC106800.2-201ENST00000514009 1103 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 OR5G4P-201ENST00000525251 760 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AP001994.1-201ENST00000527539 826 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC007537.1-201ENST00000539347 327 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL121766.1-201ENST00000547436 487 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 OR11H3P-201ENST00000554547 982 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL133241.1-201ENST00000556832 487 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 SNORA70D-201ENST00000578836 135 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC011193.2-201ENST00000582638 367 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 VN1R82P-201ENST00000601481 356 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AC015922.4-201ENST00000612568 690 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RMST_5.1-201ENST00000618704 126 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 MAPK10-365ENST00000641902 3825 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 MAPK10-383ENST00000642032 3390 ntBASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NUP43Q8NFH3 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 AL359263.1-201ENST00000441188 2796 ntBASIC6.48□□□□□ -1.37
NUP43Q8NFH3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NUP43Q8NFH3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms