Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 FRG1DP-201ENST00000635586 771 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 OR5AC4P-202ENST00000642086 985 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC011416.1-201ENST00000514947 1732 ntBASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD4Q6ZW05 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RNA5SP382-201ENST00000363355 112 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RN7SKP191-201ENST00000364713 306 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL136100.1-201ENST00000407696 330 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RNU2-22P-201ENST00000411266 212 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL139135.1-201ENST00000412675 209 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL158050.1-201ENST00000416077 457 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC092447.3-201ENST00000426027 686 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC069277.2-201ENST00000454211 432 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL445687.2-201ENST00000458156 728 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC114940.1-201ENST00000512162 1265 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC084851.2-201ENST00000530377 364 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 MRPL45P2-203ENST00000573318 473 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 MIR378H-201ENST00000579966 83 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 MTCO3P22-201ENST00000603219 784 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC009974.1-201ENST00000608881 455 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC093635.1-201ENST00000609028 555 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC087683.2-201ENST00000611384 326 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL078595.3-201ENST00000623815 1166 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC126544.2-201ENST00000625174 749 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AL359976.1-201ENST00000418655 3528 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC092692.1-201ENST00000623625 2595 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 CAP1P2-201ENST00000417455 1409 ntBASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCHD4Q6ZW05 AC004656.1-201ENST00000568479 4951 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SEPT7P7-201ENST00000420492 1301 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 RPL12P23-201ENST00000405880 490 ntBASIC5.8□□□□□ -1.48
PTCHD4Q6ZW05 BX664727.1-201ENST00000416024 466 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms