Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RPS3AP2-201ENST00000407190 754 ntBASIC5.82□□□□□ -1.48
PDX1P52945 RN7SKP293-201ENST00000411389 296 ntBASIC5.82□□□□□ -1.48
PDX1P52945 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 MARK2P12-201ENST00000420129 585 ntBASIC5.82□□□□□ -1.48
PDX1P52945 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 BX119321.1-201ENST00000428912 797 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AL121776.1-201ENST00000429337 372 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 AC013410.1-201ENST00000436223 1232 ntBASIC5.82□□□□□ -1.48
PDX1P52945 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 AC007386.1-201ENST00000455212 582 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AL122020.1-201ENST00000472287 459 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AL136038.1-201ENST00000497246 351 ntBASIC5.82□□□□□ -1.48
PDX1P52945 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.82□□□□□ -1.48
PDX1P52945 ATP5LP3-201ENST00000514223 304 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.82□□□□□ -1.48
PDX1P52945 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.82□□□□□ -1.48
PDX1P52945 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
PDX1P52945 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.82□□□□□ -1.48
PDX1P52945 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 AC010547.6-201ENST00000571789 193 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AP000919.1-201ENST00000582850 985 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AC138473.1-201ENST00000605717 526 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AC096861.1-201ENST00000616652 240 ntBASIC5.82□□□□□ -1.48
PDX1P52945 AL137067.2-201ENST00000621202 131 ntBASIC5.82□□□□□ -1.48
PDX1P52945 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 OR8G3P-202ENST00000641572 1255 ntBASIC5.82□□□□□ -1.48
PDX1P52945 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.82□□□□□ -1.48
PDX1P52945 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDX1P52945 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDX1P52945 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.82□□□□□ -1.48
PDX1P52945 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 CR788268.1-201ENST00000603931 1809 ntBASIC5.81□□□□□ -1.48
PDX1P52945 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDX1P52945 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDX1P52945 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PDX1P52945 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 AL391361.1-201ENST00000405580 489 ntBASIC5.81□□□□□ -1.48
PDX1P52945 RN7SKP278-201ENST00000410504 342 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 AC007562.1-201ENST00000421819 517 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 AC023274.2-201ENST00000445264 521 ntBASIC5.81□□□□□ -1.48
PDX1P52945 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.81□□□□□ -1.48
PDX1P52945 RN7SL629P-201ENST00000489622 285 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 AC147055.1-201ENST00000509261 750 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.81□□□□□ -1.48
PDX1P52945 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PDX1P52945 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 IGKV2-19-201ENST00000518132 283 ntBASIC5.81□□□□□ -1.48
PDX1P52945 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.81□□□□□ -1.48
PDX1P52945 PCNAP4-201ENST00000532690 730 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.81□□□□□ -1.48
PDX1P52945 AL356801.1-201ENST00000559320 294 ntBASIC5.81□□□□□ -1.48
PDX1P52945 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 AC007225.2-201ENST00000562529 256 ntBASIC5.81□□□□□ -1.48
PDX1P52945 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 RNU4ATAC-201ENST00000580972 127 ntBASIC5.81□□□□□ -1.48
PDX1P52945 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 AC009303.3-201ENST00000591103 736 ntBASIC5.81□□□□□ -1.48
PDX1P52945 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 AL391597.1-201ENST00000618707 694 ntBASIC5.81□□□□□ -1.48
PDX1P52945 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.81□□□□□ -1.48
PDX1P52945 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDX1P52945 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 GNL2P1-201ENST00000451274 2190 ntBASIC5.81□□□□□ -1.48
PDX1P52945 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
PDX1P52945 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDX1P52945 AC096921.2-201ENST00000561507 1916 ntBASIC5.81□□□□□ -1.48
PDX1P52945 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms