Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC092953.2-201ENST00000608000 699 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC012676.3-201ENST00000614983 479 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AC009032.1-201ENST00000617574 431 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AL137067.2-201ENST00000621202 131 ntBASIC5.95□□□□□ -1.46
PCNAP12004 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.95□□□□□ -1.46
PCNAP12004 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PCNAP12004 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 EIF3EP1-201ENST00000433978 1316 ntBASIC5.95□□□□□ -1.46
PCNAP12004 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PCNAP12004 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.95□□□□□ -1.46
PCNAP12004 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 LINC01613-201ENST00000561476 2780 ntBASIC5.95□□□□□ -1.46
PCNAP12004 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCNAP12004 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
PCNAP12004 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 AL359091.1-201ENST00000449048 1734 ntBASIC5.94□□□□□ -1.46
PCNAP12004 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 RPL23AP17-201ENST00000401064 499 ntBASIC5.94□□□□□ -1.46
PCNAP12004 RN7SKP151-201ENST00000410230 316 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 PSMD10P2-201ENST00000432890 672 ntBASIC5.94□□□□□ -1.46
PCNAP12004 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 AP000949.1-201ENST00000438328 629 ntBASIC5.94□□□□□ -1.46
PCNAP12004 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 AL445687.2-201ENST00000458156 728 ntBASIC5.94□□□□□ -1.46
PCNAP12004 RPL29P23-201ENST00000486188 442 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AC090058.1-201ENST00000498788 435 ntBASIC5.94□□□□□ -1.46
PCNAP12004 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 SNORA74.1-201ENST00000516320 180 ntBASIC5.94□□□□□ -1.46
PCNAP12004 RNU6-467P-201ENST00000517027 110 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AC021269.1-201ENST00000526860 705 ntBASIC5.94□□□□□ -1.46
PCNAP12004 NPIPB14P-203ENST00000532298 987 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 RNU4ATAC-201ENST00000580972 127 ntBASIC5.94□□□□□ -1.46
PCNAP12004 MIR5010-201ENST00000582846 120 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.94□□□□□ -1.46
PCNAP12004 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 AL591167.1-201ENST00000607321 456 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 MIR6813-201ENST00000621638 56 ntBASIC5.94□□□□□ -1.46
PCNAP12004 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.94□□□□□ -1.46
PCNAP12004 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.94□□□□□ -1.46
PCNAP12004 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCNAP12004 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCNAP12004 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 AC114876.1-201ENST00000490962 1366 ntBASIC5.93□□□□□ -1.46
PCNAP12004 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 AC024341.1-201ENST00000526444 1552 ntBASIC5.93□□□□□ -1.46
PCNAP12004 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.93□□□□□ -1.46
PCNAP12004 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCNAP12004 AL353796.1-201ENST00000561542 3241 ntBASIC5.93□□□□□ -1.46
PCNAP12004 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 RNA5SP375-201ENST00000362975 119 ntBASIC5.93□□□□□ -1.46
PCNAP12004 RNU6-1331P-201ENST00000363658 106 ntBASIC5.93□□□□□ -1.46
PCNAP12004 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.93□□□□□ -1.46
PCNAP12004 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.93□□□□□ -1.46
PCNAP12004 GNG5P2-201ENST00000372054 207 ntBASIC5.93□□□□□ -1.46
PCNAP12004 RNU6-883P-201ENST00000384597 107 ntBASIC5.93□□□□□ -1.46
PCNAP12004 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms