Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC018717.1-201ENST00000457712 1505 ntBASIC6.39□□□□□ -1.39
TPM1P09493 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TPM1P09493 AC011933.2-201ENST00000578539 2790 ntBASIC6.39□□□□□ -1.39
TPM1P09493 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.39□□□□□ -1.39
TPM1P09493 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.39□□□□□ -1.39
TPM1P09493 HSPA8P14-201ENST00000552265 1805 ntBASIC6.39□□□□□ -1.39
TPM1P09493 GNL2P1-201ENST00000451274 2190 ntBASIC6.38□□□□□ -1.39
TPM1P09493 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM1P09493 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TPM1P09493 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 RNU1-134P-201ENST00000362935 165 ntBASIC6.38□□□□□ -1.39
TPM1P09493 RN7SKP78-201ENST00000364711 318 ntBASIC6.38□□□□□ -1.39
TPM1P09493 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM1P09493 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 RNA5SP91-201ENST00000390902 119 ntBASIC6.38□□□□□ -1.39
TPM1P09493 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 PSMA6P1-201ENST00000400275 741 ntBASIC6.38□□□□□ -1.39
TPM1P09493 GPS2P1-201ENST00000411761 986 ntBASIC6.38□□□□□ -1.39
TPM1P09493 OR10T1P-201ENST00000424327 947 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AL445928.1-201ENST00000435545 222 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.38□□□□□ -1.39
TPM1P09493 GOLGA5P1-201ENST00000507317 980 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM1P09493 GAPDHP62-201ENST00000515313 990 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 NPIPB14P-203ENST00000532298 987 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM1P09493 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.38□□□□□ -1.39
TPM1P09493 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 GARSP1-201ENST00000570895 719 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM1P09493 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.38□□□□□ -1.39
TPM1P09493 AC063977.7-201ENST00000594454 337 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 MIR6133-201ENST00000617057 108 ntBASIC6.38□□□□□ -1.39
TPM1P09493 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.38□□□□□ -1.39
TPM1P09493 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TPM1P09493 AL603750.1-201ENST00000624216 1717 ntBASIC6.38□□□□□ -1.39
TPM1P09493 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TPM1P09493 Z95331.1-201ENST00000623075 23112 ntBASIC6.38□□□□□ -1.39
TPM1P09493 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TPM1P09493 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
TPM1P09493 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
TPM1P09493 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 AC092376.2-201ENST00000622621 4116 ntBASIC6.37□□□□□ -1.39
TPM1P09493 ABCC13-202ENST00000463099 3842 ntBASIC6.37□□□□□ -1.39
TPM1P09493 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TPM1P09493 AC068870.3-201ENST00000625077 2536 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.37□□□□□ -1.39
TPM1P09493 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TPM1P09493 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM1P09493 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 ZNF37CP-201ENST00000406795 241 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RNA5SP431-201ENST00000410312 120 ntBASIC6.37□□□□□ -1.39
TPM1P09493 MEAF6P1-201ENST00000416092 327 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RPS4XP5-201ENST00000419038 768 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 GAPDHP75-201ENST00000433910 943 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 AL590004.3-202ENST00000445883 451 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RPS18P1-201ENST00000447840 458 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 RBMY2HP-201ENST00000457961 720 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AC063955.1-201ENST00000462872 685 ntBASIC6.37□□□□□ -1.39
TPM1P09493 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 RPL12P30-201ENST00000488389 499 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 CR383658.1-201ENST00000514609 734 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.37□□□□□ -1.39
TPM1P09493 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM1P09493 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.37□□□□□ -1.39
TPM1P09493 AC092944.2-201ENST00000605443 889 ntBASIC6.37□□□□□ -1.39
TPM1P09493 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.37□□□□□ -1.39
TPM1P09493 AL357562.1-201ENST00000624911 609 ntBASIC6.37□□□□□ -1.39
TPM1P09493 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM1P09493 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TPM1P09493 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms