Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC025470.1-201ENST00000510053 2032 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 RNU1-136P-201ENST00000384181 164 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC087752.1-201ENST00000391360 558 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 RN7SKP29-201ENST00000410957 272 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 CLNS1AP1-201ENST00000435954 682 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 OR7E116P-201ENST00000448529 957 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC118758.1-202ENST00000454719 225 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 RN7SL57P-201ENST00000493687 290 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 GLUD1P3-202ENST00000508551 200 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC006530.1-201ENST00000555980 571 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC026826.3-201ENST00000561747 158 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC018690.1-201ENST00000608144 626 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC097641.3-201ENST00000613523 464 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL591926.1-201ENST00000620542 217 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AC022400.9-201ENST00000623633 273 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 AL683826.1-201ENST00000624104 627 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 PDZK1P1-202ENST00000425209 1350 ntBASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VPS29Q9UBQ0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 LYARP1-201ENST00000436977 1501 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL355488.2-201ENST00000609909 2850 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC093297.3-201ENST00000607056 2517 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 BX284632.2-201ENST00000421091 399 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL512605.1-202ENST00000441919 381 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL359955.2-201ENST00000445380 353 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC073072.2-201ENST00000447425 348 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC104339.1-201ENST00000465478 348 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 RN7SL193P-201ENST00000491708 276 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL117692.1-201ENST00000494283 713 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 OR7E157P-201ENST00000494376 911 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 LSM3P4-201ENST00000502948 309 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC074255.1-201ENST00000511259 501 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 RNA5SP340-201ENST00000517132 107 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 RN7SKP183-201ENST00000517169 324 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 DPPA3P2-202ENST00000557188 1219 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL356801.1-201ENST00000559320 294 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 MIR4260-201ENST00000583107 67 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AC009237.12-201ENST00000604755 742 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL035661.1-201ENST00000620459 1144 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AP001153.1-201ENST00000641024 338 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL034546.1-201ENST00000623740 3693 ntBASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.53□□□□□ -1.52
VPS29Q9UBQ0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms