Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 MAPK10-287ENST00000641217 3037 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 KCNIP2-202ENST00000343195 663 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL161781.1-201ENST00000354277 403 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 PADI4-202ENST00000375453 841 ntTSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 RNU2-18P-201ENST00000411224 162 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL590559.1-201ENST00000414338 374 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL096701.1-201ENST00000445477 457 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 UBE2V1P7-201ENST00000446395 340 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC002381.1-201ENST00000447049 280 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 MRPL21-202ENST00000450904 662 ntTSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CSH1-203ENST00000453363 632 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 BX322784.1-201ENST00000455793 1077 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CFL1P5-201ENST00000508046 502 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC010368.1-201ENST00000510160 456 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 GAPDHP62-201ENST00000515313 990 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 EVX1-AS-201ENST00000517726 480 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 IGHVIII-51-1-201ENST00000519403 302 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC005829.1-202ENST00000562555 298 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 ULK4P2-202ENST00000564187 492 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 MIR3650-201ENST00000581972 60 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC010761.2-201ENST00000584779 442 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 HMGN1P30-201ENST00000589286 268 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 NRBF2P5-201ENST00000603087 788 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC002401.3-201ENST00000620020 440 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 OR52R1-201ENST00000624978 948 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CASC19-264ENST00000641912 1184 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AC005034.3-201ENST00000604845 1747 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AP000756.2-201ENST00000624168 2567 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 NBPF8-201ENST00000583271 5330 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 AL353132.1-201ENST00000415260 2043 ntBASIC9.92□□□□□ -0.82
RTN4Q9NQC3 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
RTN4Q9NQC3 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 SOCS5P2-201ENST00000449637 1359 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC022819.1-201ENST00000563495 3910 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 ARF4P3-201ENST00000397387 509 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 RNU2-50P-201ENST00000410494 143 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 PPIAP2-201ENST00000414143 492 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC118555.1-201ENST00000426386 696 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AL445669.1-201ENST00000426743 755 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 RNF11P2-201ENST00000427702 440 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC133104.1-201ENST00000429100 218 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 MTND4LP16-201ENST00000440828 295 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 SNRPEP8-201ENST00000442866 260 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 FABP3P2-201ENST00000453169 399 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 DEFT1P2-201ENST00000453669 421 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 PGAM1P9-201ENST00000503887 755 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 HNRNPA1P44-201ENST00000503999 879 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 OR7E28P-201ENST00000505191 975 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 FAM197Y9-203ENST00000505707 345 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 ARL4AP2-201ENST00000507378 601 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 TUBB4BP5-201ENST00000512282 427 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC046134.1-201ENST00000514454 666 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC233724.2-201ENST00000515727 271 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC087664.3-201ENST00000524110 328 ntBASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC124276.2-201ENST00000527997 550 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC9.91□□□□□ -0.82
RTN4Q9NQC3 AL079307.2-201ENST00000557308 448 ntTSL 3 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms