Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC124891.1-201ENST00000536322 519 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 CHEK2P2-201ENST00000554701 672 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 RN7SL32P-201ENST00000580514 281 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC095055.1-201ENST00000603472 1113 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC084035.1-201ENST00000634543 607 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL136531.3-201ENST00000624378 3658 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC009120.2-204ENST00000621548 2032 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 CR382285.2-201ENST00000624662 1495 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL449283.1-201ENST00000602631 3403 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AL022323.4-201ENST00000623980 13120 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ZNF658B-201ENST00000602828 3408 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AP001157.1-201ENST00000550837 2339 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RNU4-92P-201ENST00000363783 136 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RNU12-2P-201ENST00000364789 156 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 SNORA70.5-201ENST00000365519 135 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 EEF1GP6-201ENST00000402309 905 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RAP1BP1-201ENST00000412709 553 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC234781.2-201ENST00000426370 994 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 MYO5BP2-201ENST00000449815 1277 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 MTCO2P18-201ENST00000457151 658 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RPS16P9-201ENST00000477220 427 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RN7SL382P-201ENST00000482631 282 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 RN7SL849P-201ENST00000485236 295 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 IGLVV-66-201ENST00000523818 341 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC012213.3-201ENST00000577199 777 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC069366.1-201ENST00000583159 838 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 OR7A8P-201ENST00000595427 913 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC091193.1-201ENST00000604640 448 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC009779.8-201ENST00000641684 4384 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 WBP11P1-201ENST00000562560 1931 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AL359715.3-201ENST00000569267 2123 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC005618.1-201ENST00000606901 3148 ntBASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.03□□□□□ -1.28
FOXP3Q9BZS1 Z97989.1-201ENST00000531702 2421 ntBASIC7.02□□□□□ -1.28
FOXP3Q9BZS1 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 STAG3L4-201ENST00000352103 530 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 RN7SKP118-201ENST00000364331 330 ntBASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.02□□□□□ -1.29
FOXP3Q9BZS1 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms