Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 DDX6P1-205ENST00000441966 1436 ntBASIC6.93□□□□□ -1.3
CDK5RAP3Q96JB5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC107977.1-201ENST00000355745 939 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 RN7SKP151-201ENST00000410230 316 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AL359885.1-201ENST00000415786 903 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 ELOCP6-201ENST00000429066 328 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 ELOCP12-201ENST00000458706 328 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 SUMO2P4-201ENST00000504193 276 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 SEC11B-201ENST00000518383 499 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 OR6M2P-201ENST00000529831 871 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 OR4A41P-201ENST00000533053 928 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC121758.1-202ENST00000556917 658 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC007494.1-201ENST00000562293 760 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC090651.1-201ENST00000567865 634 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AL078601.3-201ENST00000573303 535 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AP005136.2-201ENST00000583253 1049 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC011458.1-201ENST00000604034 617 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 QTRT1P1-201ENST00000604344 1078 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC008555.7-201ENST00000605008 583 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC048341.3-201ENST00000619323 491 ntBASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP3Q96JB5 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 RNA5SP375-201ENST00000362975 119 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC073464.3-201ENST00000422564 712 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC092865.3-201ENST00000425390 1026 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 RN7SL352P-201ENST00000466002 277 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 RN7SL568P-201ENST00000493069 298 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 RN7SL362P-201ENST00000494228 267 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC009879.1-201ENST00000520029 839 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 AL136520.1-201ENST00000600311 1322 ntBASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP3Q96JB5 DDX18P6-201ENST00000450119 1997 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms