Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL359885.1-201ENST00000415786 903 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC021876.1-201ENST00000425959 359 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AL354893.1-201ENST00000433735 348 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC073410.1-201ENST00000435125 589 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 XKRYP6-201ENST00000440468 1116 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 XKRYP3-201ENST00000442113 1116 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 RPL5P7-201ENST00000444235 813 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 RN7SL269P-201ENST00000467795 305 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 RPL9P15-201ENST00000491096 532 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC083795.1-201ENST00000491760 320 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AL158068.1-201ENST00000506116 616 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 NPM1P42-201ENST00000560329 862 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AP005119.1-201ENST00000580956 292 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC009303.3-201ENST00000591103 736 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC097520.1-201ENST00000624435 385 ntBASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.9□□□□□ -1.46
ZNF549Q6P9A3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 PPBPP2-201ENST00000513150 1362 ntBASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
ZNF549Q6P9A3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 GNL2P1-201ENST00000451274 2190 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 SNORA51.9-201ENST00000384295 124 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 DHFRP5-201ENST00000406944 564 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 SNRPEP6-201ENST00000407465 277 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 GABARAPL3-201ENST00000412799 354 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 GTF3AP1-201ENST00000416942 1004 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC244033.1-201ENST00000426826 870 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC099677.3-201ENST00000427081 395 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 RPL12P16-201ENST00000431098 498 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC096632.2-201ENST00000438139 1239 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 MTND1P26-201ENST00000440488 538 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 RPS7P3-201ENST00000443360 580 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 YRDCP3-201ENST00000456507 480 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 snoU13.29-201ENST00000459370 104 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AL603882.1-201ENST00000463059 681 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC015908.1-201ENST00000478739 476 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AGGF1P3-201ENST00000493675 1213 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC009879.1-201ENST00000520029 839 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 OR4R2P-201ENST00000530815 597 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 MTND5P21-201ENST00000531961 522 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC009268.1-201ENST00000561352 1203 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 BNIP3P27-201ENST00000599991 412 ntBASIC5.89□□□□□ -1.47
ZNF549Q6P9A3 AC138473.1-201ENST00000605717 526 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms