Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FAM78BQ5VT40 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 OR10R3P-201ENST00000361688 942 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 YWHAZP4-201ENST00000392459 708 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RNA5SP296-201ENST00000410523 111 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RPL21P50-201ENST00000417698 477 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC112492.2-201ENST00000432774 1030 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC245291.3-201ENST00000443400 292 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 POU5F1P5-201ENST00000445059 658 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RN7SL197P-201ENST00000466981 299 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RN7SL836P-201ENST00000476140 296 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RPL5P22-201ENST00000480199 884 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 OR11I1P-201ENST00000486033 954 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MORF4L2P1-201ENST00000503761 858 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 GLUD1P3-202ENST00000508551 200 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 CYCSP25-201ENST00000525280 316 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AP004609.2-201ENST00000532177 190 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC084824.2-201ENST00000548906 345 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL359219.2-201ENST00000555184 348 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC009852.2-201ENST00000567898 485 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC090826.1-203ENST00000569235 490 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL163952.1-202ENST00000569625 600 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC026898.1-201ENST00000586404 571 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC119403.2-201ENST00000590960 598 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MIR6885-201ENST00000612241 66 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC138965.3-201ENST00000623875 498 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 CDC27P2-201ENST00000425026 1922 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 AC002525.1-201ENST00000624392 1622 ntBASIC4.67□□□□□ -1.66
FAM78BQ5VT40 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FAM78BQ5VT40 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 CASC19-248ENST00000641674 1356 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 RNA5SP346-201ENST00000363541 121 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 RNU105B-201ENST00000364478 208 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 AC087752.1-201ENST00000391360 558 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 DHFRP2-201ENST00000414224 547 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 RPS7P8-201ENST00000418311 581 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 RPS15AP30-201ENST00000420976 390 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 AC002127.1-201ENST00000421305 225 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 CRIP1P1-201ENST00000427567 185 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.66□□□□□ -1.66
FAM78BQ5VT40 AC234771.2-201ENST00000445718 597 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 RPS18P1-201ENST00000447840 458 ntBASIC4.66□□□□□ -1.66
FAM78BQ5VT40 FRG2FP-204ENST00000453982 852 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms