Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SNX18P12-201ENST00000624821 759 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 AC093671.1-201ENST00000624981 2929 ntBASIC5.28□□□□□ -1.56
H3F3AP84243 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.28□□□□□ -1.56
H3F3AP84243 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H3F3AP84243 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
H3F3AP84243 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.28□□□□□ -1.56
H3F3AP84243 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.27□□□□□ -1.57
H3F3AP84243 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.27□□□□□ -1.57
H3F3AP84243 AL161756.3-201ENST00000641216 2071 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 AL731532.1-201ENST00000623972 4236 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
H3F3AP84243 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
H3F3AP84243 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 PFN1P8-201ENST00000497012 543 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 OR5H7P-201ENST00000514084 930 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 AC097486.1-201ENST00000515331 210 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 snoU109.5-201ENST00000516231 132 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 RNA5SP438-201ENST00000516561 112 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 PCNAP4-201ENST00000532690 730 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 AL121594.2-201ENST00000541658 472 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.27□□□□□ -1.57
H3F3AP84243 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.27□□□□□ -1.57
H3F3AP84243 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 AP001267.4-201ENST00000602598 545 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 AL139099.4-201ENST00000614802 114 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.27□□□□□ -1.57
H3F3AP84243 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
H3F3AP84243 AC119674.1-217ENST00000641942 1086 ntBASIC5.27□□□□□ -1.57
H3F3AP84243 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H3F3AP84243 AL161912.4-201ENST00000623889 2468 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3AP84243 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H3F3AP84243 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H3F3AP84243 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 RNU1-150P-201ENST00000362491 162 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 OR7E156P-201ENST00000400303 464 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3AP84243 AC066692.1-201ENST00000421721 457 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 RPL5P2-201ENST00000429598 854 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 USP24P1-201ENST00000433802 779 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AC073410.1-201ENST00000435125 589 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
H3F3AP84243 NDUFS5P5-201ENST00000437256 321 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3AP84243 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3AP84243 OSTCP1-201ENST00000455507 450 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3AP84243 MIR2117-201ENST00000516780 80 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AC060775.1-201ENST00000518241 520 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.26□□□□□ -1.57
H3F3AP84243 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 AC006530.1-201ENST00000555980 571 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.26□□□□□ -1.57
H3F3AP84243 AL163952.1-202ENST00000569625 600 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 TXNP4-201ENST00000575018 310 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3AP84243 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.26□□□□□ -1.57
H3F3AP84243 AC079315.1-201ENST00000602952 623 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 MIR6071-201ENST00000616741 78 ntBASIC5.26□□□□□ -1.57
H3F3AP84243 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.26□□□□□ -1.57
H3F3AP84243 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3AP84243 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.26□□□□□ -1.57
H3F3AP84243 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
H3F3AP84243 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
H3F3AP84243 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
H3F3AP84243 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H3F3AP84243 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms