Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC005189.1-201ENST00000431286 310 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC007563.3-201ENST00000433233 371 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 RPL12P15-201ENST00000433385 499 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 RPL14P5-201ENST00000436474 730 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 XKRYP5-201ENST00000449659 483 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.93□□□□□ -1.3
COL8A1P27658 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 SAP18P1-201ENST00000512058 390 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 RN7SKP13-201ENST00000515933 244 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 NPM1P52-201ENST00000518264 846 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 ELOCP31-201ENST00000540463 467 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC004825.1-201ENST00000555068 586 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
COL8A1P27658 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 PCMTD1P2-201ENST00000565017 355 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC107954.1-201ENST00000565906 727 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 MIR3913-1-201ENST00000577744 102 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 RN7SL154P-201ENST00000578043 324 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC010385.2-201ENST00000603743 490 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 AL592494.3-201ENST00000609485 464 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 AC010533.1-201ENST00000624875 2105 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.93□□□□□ -1.3
COL8A1P27658 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.93□□□□□ -1.3
COL8A1P27658 MIR1302-1-201ENST00000637932 143 ntBASIC6.93□□□□□ -1.3
COL8A1P27658 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.93□□□□□ -1.3
COL8A1P27658 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 FTO-222ENST00000637969 2889 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 PSG3-204ENST00000595140 1724 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
COL8A1P27658 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
COL8A1P27658 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL8A1P27658 AC093616.1-201ENST00000427434 2095 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 AC011297.1-201ENST00000620503 2110 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
COL8A1P27658 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
COL8A1P27658 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
COL8A1P27658 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.92□□□□□ -1.3
COL8A1P27658 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 RBMX2P2-201ENST00000257020 946 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL8A1P27658 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC6.92□□□□□ -1.3
COL8A1P27658 SNRPEP2-201ENST00000397592 279 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 Z97832.1-201ENST00000402490 328 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 GSTA9P-201ENST00000406231 611 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 AC093084.1-201ENST00000424233 687 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 AL022238.1-201ENST00000442557 355 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AL356121.1-201ENST00000442911 156 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AL356133.1-201ENST00000444762 372 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 YWHAQP9-201ENST00000445891 512 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 ARL2BPP10-201ENST00000446487 531 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
COL8A1P27658 Z82190.1-201ENST00000454534 490 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 SNORA35.1-201ENST00000458908 128 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 MTCO2P29-201ENST00000465212 189 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 ACTR3P3-201ENST00000480448 893 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AC009153.1-201ENST00000485799 496 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AC106822.1-201ENST00000502647 526 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AC112203.1-201ENST00000506315 1020 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.92□□□□□ -1.3
COL8A1P27658 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.92□□□□□ -1.3
COL8A1P27658 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
COL8A1P27658 RNU6-430P-201ENST00000517078 107 ntBASIC6.92□□□□□ -1.3
COL8A1P27658 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms