Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SLC28A1O00337 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC012254.3-201ENST00000591183 2117 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC28A1O00337 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC28A1O00337 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 AC092070.2-203ENST00000598377 3644 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC28A1O00337 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.67□□□□□ -1.5
SLC28A1O00337 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 NPM1P37-201ENST00000403105 874 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AL354868.1-201ENST00000417077 482 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 RPS4XP5-201ENST00000419038 768 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 RPS19P6-201ENST00000441327 433 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AL445466.1-201ENST00000448432 357 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AC006539.1-201ENST00000481419 501 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 HMGN1P17-201ENST00000513734 295 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 RNU2-45P-201ENST00000516068 187 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AC025423.2-201ENST00000537570 439 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 AC126615.2-201ENST00000553003 515 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 ZNF322P1-201ENST00000568013 1209 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 RN7SL230P-201ENST00000580835 303 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.67□□□□□ -1.5
SLC28A1O00337 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 NF1P10-201ENST00000613227 742 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 FAM27E2-201ENST00000619668 403 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AC073488.3-201ENST00000631611 778 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 AC079776.5-201ENST00000641920 211 ntBASIC5.67□□□□□ -1.5
SLC28A1O00337 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SLC28A1O00337 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SLC28A1O00337 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC087516.1-201ENST00000561236 2428 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC138907.8-201ENST00000623981 2256 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SLC28A1O00337 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 RN7SKP279-201ENST00000411383 298 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC073072.2-201ENST00000447425 348 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 RN7SL254P-201ENST00000460609 284 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 RN7SL284P-201ENST00000498823 275 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 SNORD116-30-201ENST00000516468 85 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC130364.2-201ENST00000528639 604 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AC007346.1-201ENST00000569208 867 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 GARSP1-201ENST00000570895 719 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AL078601.3-201ENST00000573303 535 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 VN1R81P-201ENST00000602085 372 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AC073333.2-201ENST00000603589 769 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 AC145423.1-201ENST00000605712 336 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.66□□□□□ -1.5
SLC28A1O00337 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.66□□□□□ -1.5
SLC28A1O00337 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms