Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MIR6806-201ENST00000622141 64 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 MTND5P11-201ENST00000511037 1812 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 AC068733.2-201ENST00000605434 1418 ntBASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
COL4A3BPQ9Y5P4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AL161901.1-201ENST00000624954 3425 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC105235.1-201ENST00000623208 1816 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC104297.1-201ENST00000393779 870 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 RNU4-74P-201ENST00000411280 161 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL21P50-201ENST00000417698 477 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 VN1R20P-201ENST00000425215 966 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AKR1B10P1-201ENST00000425765 942 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 ATP5G1P3-201ENST00000463301 410 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC107015.1-201ENST00000466902 747 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 OR7E22P-201ENST00000478335 1035 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 OR9A1P-202ENST00000484361 945 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC121161.1-201ENST00000510606 652 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 RNA5SP418-201ENST00000515951 117 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 HAUS1P3-201ENST00000523909 662 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC034236.3-201ENST00000605999 461 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AL391834.2-201ENST00000609982 546 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AP003476.1-201ENST00000623984 516 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AL121950.1-201ENST00000624993 2077 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 AC018628.1-201ENST00000624147 3819 ntBASIC7.16□□□□□ -1.26
COL4A3BPQ9Y5P4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC241584.2-201ENST00000637142 2090 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 RPL11P4-201ENST00000332269 436 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 SNORD35A-201ENST00000363389 86 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 RNA5SP198-201ENST00000410376 127 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 VN1R42P-201ENST00000424651 344 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 VN1R38P-201ENST00000450265 887 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 GM2AP2-201ENST00000491764 562 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC113367.2-201ENST00000505749 160 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 BUD31P1-201ENST00000521828 359 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 CYCSP25-201ENST00000525280 316 ntBASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.15□□□□□ -1.26
COL4A3BPQ9Y5P4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms