Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL031658.2-201ENST00000616850 651 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 U1.34-201ENST00000618578 162 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 U1.31-201ENST00000620022 160 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC080188.3-201ENST00000624842 748 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC005725.1-201ENST00000577346 2607 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 MAPK10-287ENST00000641217 3037 ntBASIC6.33□□□□□ -1.4
EBF3Q9H4W6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.33□□□□□ -1.4
EBF3Q9H4W6 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL096711.1-201ENST00000404780 554 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 MTND3P20-201ENST00000407663 186 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 RNA5SP178-201ENST00000410380 128 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL354890.1-201ENST00000413730 346 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 UBE2V1P14-201ENST00000415815 558 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC079355.1-201ENST00000421770 223 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 RPL12P12-201ENST00000424633 501 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 PCBP2P1-201ENST00000437262 977 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 OR52A4P-202ENST00000481634 799 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC093815.1-201ENST00000508637 280 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC027544.3-201ENST00000535082 757 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC005244.1-201ENST00000582566 339 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL645933.2-201ENST00000606743 1207 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 MIR6809-201ENST00000612189 116 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL354696.1-201ENST00000614652 497 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC126175.1-201ENST00000617041 758 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 OR7A1P-202ENST00000641542 1158 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC024587.1-201ENST00000505925 2157 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AC119674.1-202ENST00000641333 1860 ntBASIC6.32□□□□□ -1.4
EBF3Q9H4W6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.32□□□□□ -1.4
EBF3Q9H4W6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 MIR323A-201ENST00000362199 86 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 MIR1203-201ENST00000408812 85 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AL096829.1-201ENST00000413677 457 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 BX323845.3-201ENST00000428215 527 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC097523.2-201ENST00000435551 652 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC009237.1-201ENST00000442127 744 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 TRIM60P16-201ENST00000444048 694 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 RPL36AP39-201ENST00000445859 318 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AP006222.1-205ENST00000450734 457 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 SNX18P26-201ENST00000458433 740 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC018635.1-201ENST00000468292 1030 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 RN7SL214P-201ENST00000487317 265 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC233702.7-202ENST00000582941 211 ntBASIC6.31□□□□□ -1.4
EBF3Q9H4W6 AC027229.1-201ENST00000583887 253 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms