Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL008987.1-201ENST00000415528 237 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL445567.1-201ENST00000439121 144 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 NPM1P23-201ENST00000440193 849 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 HSFY3P-201ENST00000444242 1191 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL589880.1-201ENST00000448271 287 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MTND2P19-201ENST00000449129 1012 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 YRDCP3-201ENST00000456507 480 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RN7SL267P-201ENST00000485107 261 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC074386.1-206ENST00000487102 761 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 EIF4E2P2-201ENST00000492033 736 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RPF2P2-201ENST00000504693 896 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 MTCO3P7-201ENST00000510008 774 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RNU6-1028P-201ENST00000517164 93 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 GLYATL1P4-201ENST00000529326 906 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC089984.3-201ENST00000552838 363 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL512310.9-201ENST00000553311 948 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC090971.3-201ENST00000557871 1041 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 PRELID3BP3-201ENST00000584963 545 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC105129.3-201ENST00000605455 485 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 TUSC7.1-201ENST00000610969 165 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC025287.2-201ENST00000621911 668 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC012629.3-201ENST00000623397 328 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AL356585.10-201ENST00000641883 123 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 AC007485.2-201ENST00000623493 1667 ntBASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
FOXP3Q9BZS1 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL731556.1-201ENST00000394628 3711 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LCOR-201ENST00000286067 4542 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 DOCK11P1-201ENST00000553480 5932 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 MIR365B-201ENST00000362317 111 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL355379.1-201ENST00000405542 640 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 YWHAZP5-201ENST00000419975 730 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AKR1B10P1-201ENST00000425765 942 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 BX119904.1-201ENST00000432026 348 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AL451136.1-201ENST00000435399 325 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 PSMD8P1-201ENST00000436275 769 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 RPL21P33-201ENST00000444831 484 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 EXTL2P1-201ENST00000446218 416 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 H3F3AP3-201ENST00000497682 407 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC111000.2-201ENST00000507775 550 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 SCARNA18.2-201ENST00000516882 84 ntBASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
FOXP3Q9BZS1 AC131935.1-201ENST00000524621 333 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms