Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 CLNS1AP1-201ENST00000435954 682 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 GAPDHP33-201ENST00000443168 1013 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC092967.1-201ENST00000449016 481 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 RBMY2EP-202ENST00000456360 940 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AL139824.2-201ENST00000458731 1095 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC099340.1-201ENST00000475247 599 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 RN7SL37P-201ENST00000490461 307 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 PPM1AP1-201ENST00000502740 1135 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC105391.1-201ENST00000503155 1045 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC121161.1-201ENST00000510606 652 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 RFPL4AP3-201ENST00000515267 345 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC096661.1-201ENST00000515870 822 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 IGKV1D-22-201ENST00000518953 324 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC034205.1-201ENST00000520621 638 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC008429.2-201ENST00000523057 864 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 RBMS2P1-201ENST00000525031 1226 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 OR4A17P-201ENST00000526032 904 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AP003080.1-202ENST00000526526 915 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC027026.1-201ENST00000532323 742 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 MIR4312-201ENST00000579909 76 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC245052.7-201ENST00000601161 359 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AP005229.2-201ENST00000609980 697 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AL352984.2-202ENST00000613699 155 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 AC027559.1-201ENST00000636288 271 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.84□□□□□ -1.47
PTCHD4Q6ZW05 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTCHD4Q6ZW05 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PTCHD4Q6ZW05 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.84□□□□□ -1.48
PTCHD4Q6ZW05 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
PTCHD4Q6ZW05 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC126474.2-201ENST00000623268 1750 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RNA5SP429-201ENST00000363688 109 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RPL5P20-201ENST00000403848 896 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL121835.1-201ENST00000404250 354 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 VN1R51P-201ENST00000411675 945 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL161742.1-201ENST00000418154 584 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RPL23AP85-201ENST00000421838 433 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 OR5W1P-201ENST00000423705 938 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL138479.1-201ENST00000426913 484 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC007563.3-201ENST00000433233 371 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AL121578.2-201ENST00000448797 447 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RPL7L1P3-201ENST00000455249 689 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 RPL5P14-201ENST00000494197 878 ntBASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD4Q6ZW05 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms