Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLDN20P56880 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN20P56880 CUL4AP1-201ENST00000514750 1863 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 Y_RNA.710-201ENST00000516975 110 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC006512.2-201ENST00000543250 486 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC092865.1-201ENST00000544395 1023 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN20P56880 DPPA3P2-202ENST00000557188 1219 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC012414.2-201ENST00000559474 187 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC026826.3-201ENST00000561747 158 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC002519.2-203ENST00000567043 837 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 MIR4271-201ENST00000582451 67 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 MIR4701-201ENST00000583094 63 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC027229.1-201ENST00000583887 253 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN20P56880 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC025857.2-201ENST00000602711 238 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 AL929601.4-201ENST00000613011 1341 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 RNA5SP439-201ENST00000617595 124 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN20P56880 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 AC079753.1-201ENST00000623243 3868 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC018628.1-201ENST00000624147 3819 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 MTND4P21-201ENST00000453886 1357 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN20P56880 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLDN20P56880 OR6K3-202ENST00000368146 996 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN20P56880 MIR433-201ENST00000384837 93 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN20P56880 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 OR1F12-201ENST00000402365 945 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.6□□□□□ -1.51
CLDN20P56880 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC007562.1-201ENST00000421819 517 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL445528.1-201ENST00000426330 420 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 EIF2S2P3-201ENST00000428356 999 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 ZFAND6P1-201ENST00000434138 605 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 MTND4P15-201ENST00000437913 1033 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR13K1P-201ENST00000444577 975 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC023274.2-201ENST00000445264 521 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL035690.1-201ENST00000490892 383 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 RN7SL284P-201ENST00000498823 275 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR7E99P-201ENST00000505750 922 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 NPM1P52-201ENST00000518264 846 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 BCAS2P1-201ENST00000528022 632 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CLDN20P56880 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 ADAD1P2-201ENST00000588476 646 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.6□□□□□ -1.51
CLDN20P56880 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC026367.3-201ENST00000619032 590 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC069234.4-201ENST00000621276 412 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AC080188.3-201ENST00000624842 748 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 AP001052.1-201ENST00000626421 99 ntBASIC5.6□□□□□ -1.51
CLDN20P56880 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.6□□□□□ -1.51
CLDN20P56880 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLDN20P56880 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 221.6 ms