Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 HCG18-244ENST00000602516 2890 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 RNA5SP435-201ENST00000364044 108 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL590762.1-201ENST00000391782 432 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SLC9B1P2-201ENST00000398120 1184 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL445213.1-201ENST00000412589 747 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC008173.1-201ENST00000418901 264 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 C8orf59P1-201ENST00000429930 303 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 COX4I1P2-201ENST00000447446 547 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL133217.1-201ENST00000450980 425 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 GLRXP3-201ENST00000470810 321 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 HPRT1P1-201ENST00000509498 657 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC133963.2-201ENST00000513686 578 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 AC011451.2-201ENST00000604303 598 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 MIR6729-201ENST00000618194 65 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 MRPS17P1-201ENST00000596009 3130 ntBASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
CSB-PGBD3P0DP91 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 RPL11P4-201ENST00000332269 436 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 RNU4-75P-201ENST00000364621 146 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 MIR188-201ENST00000385034 86 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 GSTA8P-201ENST00000404253 637 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 Z68694.1-201ENST00000413929 841 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 LINC01881-201ENST00000416103 412 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 ABCA11P-202ENST00000504019 2110 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC113420.1-201ENST00000507903 571 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 OR7E128P-201ENST00000532736 1024 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AC022106.1-201ENST00000612834 766 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 AL356317.1-201ENST00000396110 1436 ntBASIC8.97□□□□□ -0.97
CSB-PGBD3P0DP91 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms