Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC009237.4-201ENST00000441078 238 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 MTND5P2-201ENST00000442927 1142 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 MTCO2P25-201ENST00000447065 681 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 MTND1P29-201ENST00000448112 647 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 RN7SL751P-201ENST00000473281 284 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC109464.1-201ENST00000511091 819 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 CYP4F27P-201ENST00000514557 494 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC138832.1-201ENST00000522871 556 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 NDUFA3P4-201ENST00000560814 250 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 VN1R82P-201ENST00000601481 356 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AL583832.1-201ENST00000603227 784 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC009220.3-201ENST00000604318 586 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AF001550.2-201ENST00000636643 217 ntBASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
TRAIPQ9BWF2 AC123769.2-201ENST00000624332 5984 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC068870.3-201ENST00000625077 2536 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MFSD8-219ENST00000641228 2559 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OR51A10P-201ENST00000307165 937 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SNORA68-201ENST00000384437 133 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 FAUP2-201ENST00000394301 401 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC073069.1-201ENST00000428657 441 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 ATP5F1P1-201ENST00000433775 569 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MTND4P32-201ENST00000437189 1237 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 RPL23AP76-201ENST00000441860 458 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 CYCSP44-201ENST00000448560 313 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 PNPLA4P1-201ENST00000458328 305 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 RPL23AP71-201ENST00000470966 469 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MYL6P4-201ENST00000477911 453 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 RPS3AP43-201ENST00000479743 781 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 GAPDHP36-201ENST00000480688 918 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC106822.1-201ENST00000502647 526 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC090971.3-201ENST00000557871 1041 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AL031846.1-201ENST00000560933 314 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 RN7SL178P-201ENST00000582930 304 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC006539.2-201ENST00000601729 572 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC097381.3-201ENST00000608962 462 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AL450489.1-201ENST00000612071 468 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC018628.1-201ENST00000624147 3819 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC010608.2-201ENST00000624830 470 ntBASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
TRAIPQ9BWF2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms