Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 OR4K7P-201ENST00000580232 945 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 OR5AH1P-201ENST00000595968 283 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AP005137.2-201ENST00000609238 400 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AL121782.1-201ENST00000611242 413 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AL391903.2-201ENST00000614532 247 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC124319.3-201ENST00000616832 526 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AL357080.1-201ENST00000617394 239 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 ELF2P3-201ENST00000445099 1506 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC090181.3-201ENST00000624777 1514 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 XRCC6P5-201ENST00000435236 1795 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 GUCY2GP-201ENST00000479705 3222 ntBASIC8.06□□□□□ -1.12
RNF135Q8IUD6 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
RNF135Q8IUD6 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 Y_RNA.70-201ENST00000362886 110 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 U3.14-201ENST00000365363 227 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ARL4AP5-201ENST00000404372 599 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC019050.1-201ENST00000418508 492 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 FAM96AP1-201ENST00000430879 482 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 MTND6P5-201ENST00000448266 512 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 RN7SL861P-201ENST00000473793 285 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC044810.1-201ENST00000480271 711 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 RPL34P33-201ENST00000486062 334 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 GLYCAM1-201ENST00000546596 285 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 RPL27-205ENST00000589037 585 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC069209.1-201ENST00000619282 651 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC012414.7-202ENST00000622705 1090 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 OR5H6-203ENST00000642105 978 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 AC145138.1-201ENST00000512908 2851 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ATP5BP1-201ENST00000411980 1574 ntBASIC8.05□□□□□ -1.12
RNF135Q8IUD6 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF135Q8IUD6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF135Q8IUD6 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.04□□□□□ -1.12
RNF135Q8IUD6 AL157700.1-201ENST00000561973 1432 ntBASIC8.04□□□□□ -1.12
RNF135Q8IUD6 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RNF135Q8IUD6 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF135Q8IUD6 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF135Q8IUD6 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms