Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC105749.1-201ENST00000631338 2008 ntBASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
CCDC144BQ3MJ40 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL645568.2-201ENST00000432815 1337 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC107021.2-201ENST00000567714 2095 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RNU1-84P-201ENST00000365447 164 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RNU6-468P-201ENST00000384003 109 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AP002784.2-201ENST00000397300 549 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CHMP1B2P-201ENST00000399581 597 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RNA5SP198-201ENST00000410376 127 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 UBE2V1P9-201ENST00000414760 368 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC114973.1-201ENST00000429057 632 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 NDUFA5P10-201ENST00000432147 357 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL020997.1-201ENST00000446554 349 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 snoU109.3-201ENST00000459477 145 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL552P-201ENST00000462094 276 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SUMO2P4-201ENST00000504193 276 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC111000.6-201ENST00000514471 709 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 HAUS1P3-201ENST00000523909 662 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 KCTD9P4-201ENST00000526766 1166 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL121594.4-201ENST00000556211 1196 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL845552.1-201ENST00000556820 323 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AGGF1P9-201ENST00000561884 913 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL078601.3-201ENST00000573303 535 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL199P-201ENST00000578752 281 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL656P-201ENST00000579044 281 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL270P-201ENST00000579643 281 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL078623.1-201ENST00000602702 907 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL953862.2-201ENST00000603089 820 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RN7SL261P-201ENST00000613441 282 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC008147.4-201ENST00000617570 1204 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC126544.2-201ENST00000625174 749 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 NEPNP-201ENST00000404786 1371 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AL731556.1-201ENST00000394628 3711 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 AC012213.2-201ENST00000562917 4597 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 TMCC1P1-201ENST00000518897 1980 ntBASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CCDC144BQ3MJ40 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL662795.2-201ENST00000624252 3706 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 HSPD1P14-201ENST00000432666 1618 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AP002370.1-201ENST00000528055 1602 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 SNORA38B-201ENST00000363524 131 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 RN7SKP28-201ENST00000364770 305 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL451142.1-201ENST00000375867 775 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 MIR323B-201ENST00000385269 82 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 YWHAZP6-201ENST00000399764 738 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AC017035.1-201ENST00000411999 1115 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 XKRYP4-201ENST00000414395 483 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 PTP4A1P7-201ENST00000423476 514 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 AL389925.1-201ENST00000432257 728 ntBASIC7.54□□□□□ -1.2
CCDC144BQ3MJ40 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms