Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.37□□□□□ -1.39
CASP4P49662 RPL12P48-201ENST00000605620 304 ntBASIC6.37□□□□□ -1.39
CASP4P49662 AL139099.4-201ENST00000614802 114 ntBASIC6.37□□□□□ -1.39
CASP4P49662 FO681491.1-202ENST00000623392 737 ntBASIC6.37□□□□□ -1.39
CASP4P49662 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.37□□□□□ -1.39
CASP4P49662 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.37□□□□□ -1.39
CASP4P49662 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CASP4P49662 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CASP4P49662 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CASP4P49662 BX284613.1-201ENST00000452221 1641 ntBASIC6.36□□□□□ -1.39
CASP4P49662 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 RNU1-150P-201ENST00000362491 162 ntBASIC6.36□□□□□ -1.39
CASP4P49662 SUGT1P2-201ENST00000379452 992 ntBASIC6.36□□□□□ -1.39
CASP4P49662 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 MRPL53P1-201ENST00000414323 319 ntBASIC6.36□□□□□ -1.39
CASP4P49662 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.36□□□□□ -1.39
CASP4P49662 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.36□□□□□ -1.39
CASP4P49662 NPM1P25-201ENST00000429734 854 ntBASIC6.36□□□□□ -1.39
CASP4P49662 MRPS21P3-201ENST00000436696 262 ntBASIC6.36□□□□□ -1.39
CASP4P49662 AC015983.1-201ENST00000441577 373 ntBASIC6.36□□□□□ -1.39
CASP4P49662 AL359839.1-201ENST00000451975 1160 ntBASIC6.36□□□□□ -1.39
CASP4P49662 snoU13.29-201ENST00000459370 104 ntBASIC6.36□□□□□ -1.39
CASP4P49662 RN7SL57P-201ENST00000493687 290 ntBASIC6.36□□□□□ -1.39
CASP4P49662 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CASP4P49662 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.36□□□□□ -1.39
CASP4P49662 AP001267.4-201ENST00000602598 545 ntBASIC6.36□□□□□ -1.39
CASP4P49662 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.36□□□□□ -1.39
CASP4P49662 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.36□□□□□ -1.39
CASP4P49662 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.36□□□□□ -1.39
CASP4P49662 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CASP4P49662 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CASP4P49662 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 AC007159.1-201ENST00000566529 4706 ntBASIC6.35□□□□□ -1.39
CASP4P49662 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.35□□□□□ -1.39
CASP4P49662 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.35□□□□□ -1.39
CASP4P49662 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.35□□□□□ -1.39
CASP4P49662 OR2W4P-201ENST00000406496 926 ntBASIC6.35□□□□□ -1.39
CASP4P49662 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 TUBB4BP6-201ENST00000437576 479 ntBASIC6.35□□□□□ -1.39
CASP4P49662 KRT8P51-201ENST00000438938 274 ntBASIC6.35□□□□□ -1.39
CASP4P49662 AC079080.1-201ENST00000479841 822 ntBASIC6.35□□□□□ -1.39
CASP4P49662 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.35□□□□□ -1.39
CASP4P49662 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.35□□□□□ -1.39
CASP4P49662 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.35□□□□□ -1.39
CASP4P49662 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.35□□□□□ -1.39
CASP4P49662 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.35□□□□□ -1.39
CASP4P49662 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.35□□□□□ -1.39
CASP4P49662 AC067773.1-201ENST00000603284 1094 ntBASIC6.35□□□□□ -1.39
CASP4P49662 AL133481.2-203ENST00000607558 139 ntBASIC6.35□□□□□ -1.39
CASP4P49662 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CASP4P49662 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CASP4P49662 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
CASP4P49662 AC092070.2-203ENST00000598377 3644 ntBASIC6.35□□□□□ -1.39
CASP4P49662 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.35□□□□□ -1.39
CASP4P49662 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CASP4P49662 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 MTND5P12-201ENST00000502851 1449 ntBASIC6.34□□□□□ -1.39
CASP4P49662 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CASP4P49662 MAPK10-261ENST00000641050 3109 ntBASIC6.34□□□□□ -1.39
CASP4P49662 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 MIR1203-201ENST00000408812 85 ntBASIC6.34□□□□□ -1.39
CASP4P49662 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.34□□□□□ -1.39
CASP4P49662 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.34□□□□□ -1.39
CASP4P49662 CDY8P-201ENST00000428380 1279 ntBASIC6.34□□□□□ -1.39
CASP4P49662 SUMO2P8-201ENST00000434672 286 ntBASIC6.34□□□□□ -1.39
CASP4P49662 AL138899.2-201ENST00000439139 499 ntBASIC6.34□□□□□ -1.39
CASP4P49662 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.34□□□□□ -1.39
CASP4P49662 CDY20P-201ENST00000447528 1279 ntBASIC6.34□□□□□ -1.39
CASP4P49662 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 OR52E7P-201ENST00000452394 933 ntBASIC6.34□□□□□ -1.39
CASP4P49662 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.34□□□□□ -1.39
CASP4P49662 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CASP4P49662 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.34□□□□□ -1.39
CASP4P49662 AC002075.1-201ENST00000457396 676 ntBASIC6.34□□□□□ -1.39
CASP4P49662 AL122020.1-201ENST00000472287 459 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms