Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 RN7SKP279-201ENST00000411383 298 ntBASIC6□□□□□ -1.45
FDFT1P37268 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6□□□□□ -1.45
FDFT1P37268 KIF4CP-201ENST00000422742 1279 ntBASIC6□□□□□ -1.45
FDFT1P37268 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 AL139158.1-201ENST00000424719 340 ntBASIC6□□□□□ -1.45
FDFT1P37268 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6□□□□□ -1.45
FDFT1P37268 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 AC006539.1-201ENST00000481419 501 ntBASIC6□□□□□ -1.45
FDFT1P37268 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 AC112484.3-201ENST00000505910 329 ntBASIC6□□□□□ -1.45
FDFT1P37268 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 AP003033.2-201ENST00000528901 805 ntBASIC6□□□□□ -1.45
FDFT1P37268 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 OOSP1P2-201ENST00000579644 351 ntBASIC6□□□□□ -1.45
FDFT1P37268 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6□□□□□ -1.45
FDFT1P37268 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6□□□□□ -1.45
FDFT1P37268 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6□□□□□ -1.45
FDFT1P37268 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6□□□□□ -1.45
FDFT1P37268 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
FDFT1P37268 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
FDFT1P37268 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.99□□□□□ -1.45
FDFT1P37268 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 AC109446.4-201ENST00000623235 2755 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
FDFT1P37268 AC138907.8-201ENST00000623981 2256 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
FDFT1P37268 AC120036.2-201ENST00000509729 1474 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 SELENOWP1-201ENST00000322792 252 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 U3.10-201ENST00000364459 214 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
FDFT1P37268 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
FDFT1P37268 NPM1P37-201ENST00000403105 874 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 AL359885.1-201ENST00000415786 903 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.99□□□□□ -1.45
FDFT1P37268 BMS1P10-201ENST00000443754 1120 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.99□□□□□ -1.45
FDFT1P37268 RN7SL269P-201ENST00000467795 305 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.99□□□□□ -1.45
FDFT1P37268 RNU6-964P-201ENST00000516524 69 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
FDFT1P37268 AC126615.2-201ENST00000553003 515 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 GARSP1-201ENST00000570895 719 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 TXNP4-201ENST00000575018 310 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.99□□□□□ -1.45
FDFT1P37268 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.99□□□□□ -1.45
FDFT1P37268 AL021918.2-201ENST00000613415 194 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 AL139099.4-201ENST00000614802 114 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 MIR6721-201ENST00000617181 87 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 AC008627.1-201ENST00000517511 1704 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
FDFT1P37268 FBXL21-201ENST00000297158 1305 ntBASIC5.99□□□□□ -1.45
FDFT1P37268 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
FDFT1P37268 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.99□□□□□ -1.45
FDFT1P37268 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FDFT1P37268 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FDFT1P37268 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FDFT1P37268 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
FDFT1P37268 MIR133A2-201ENST00000347538 102 ntBASIC5.98□□□□□ -1.45
FDFT1P37268 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms