Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL6A2P12110 AC096708.4-201ENST00000620563 552 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AC012254.5-201ENST00000623573 478 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 AP001962.1-201ENST00000624114 559 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.65□□□□□ -1.34
COL6A2P12110 FKBP1AP4-201ENST00000631775 336 ntBASIC6.65□□□□□ -1.34
COL6A2P12110 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.65□□□□□ -1.34
COL6A2P12110 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
COL6A2P12110 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.65□□□□□ -1.35
COL6A2P12110 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
COL6A2P12110 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.65□□□□□ -1.35
COL6A2P12110 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL6A2P12110 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A2P12110 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.65□□□□□ -1.35
COL6A2P12110 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.65□□□□□ -1.35
COL6A2P12110 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A2P12110 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL6A2P12110 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 AL591848.4-201ENST00000567832 3472 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.64□□□□□ -1.35
COL6A2P12110 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL6A2P12110 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL6A2P12110 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 RNU6-1214P-201ENST00000363650 109 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 Y_RNA.169-201ENST00000363745 96 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 RN7SKP118-201ENST00000364331 330 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 AL391422.1-201ENST00000402155 436 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AL136310.1-201ENST00000404926 654 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC017078.1-201ENST00000416146 368 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 NAP1L4P2-201ENST00000425958 899 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 AL359265.1-201ENST00000440296 795 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 MGAT2P1-201ENST00000449718 797 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.64□□□□□ -1.35
COL6A2P12110 CYCSP42-201ENST00000450823 238 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 ART2BP-201ENST00000453501 499 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 MED28P7-201ENST00000456611 530 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AL096803.1-201ENST00000456921 1021 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 AL157777.1-201ENST00000468100 304 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 PPP1R2P6-201ENST00000478565 588 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC034244.1-201ENST00000507687 207 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC090819.1-201ENST00000523800 1111 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC091304.5-201ENST00000568969 158 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC024614.1-201ENST00000577546 307 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 WDR45BP1-201ENST00000583470 1029 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.64□□□□□ -1.35
COL6A2P12110 AL353778.1-201ENST00000603149 408 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 FXYD6P1-201ENST00000604857 285 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AC123767.1-202ENST00000620407 817 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC008626.2-201ENST00000624425 248 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL6A2P12110 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 Z98755.1-201ENST00000407015 1384 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL6A2P12110 AC021755.1-201ENST00000559747 1447 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 ZNF876P-202ENST00000398732 1485 ntBASIC6.64□□□□□ -1.35
COL6A2P12110 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms