Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 CCNT2P1-201ENST00000423082 1315 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
SFTPBP07988 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 UGT2B24P-201ENST00000514441 1597 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 RFESDP1-201ENST00000422350 461 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC007386.1-201ENST00000455212 582 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 RANP2-201ENST00000456833 229 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 AL445687.2-201ENST00000458156 728 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 RN7SL643P-201ENST00000471845 291 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 RN7SL369P-201ENST00000477138 299 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.31□□□□□ -1.56
SFTPBP07988 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC112484.3-201ENST00000505910 329 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.31□□□□□ -1.56
SFTPBP07988 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.31□□□□□ -1.56
SFTPBP07988 RNA5SP473-201ENST00000516402 125 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 RNA5SP441-201ENST00000516809 88 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 NPM1P52-201ENST00000518264 846 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC022784.5-201ENST00000522241 437 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 RPA2P3-201ENST00000533268 770 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 AP001267.4-201ENST00000602598 545 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.31□□□□□ -1.56
SFTPBP07988 AC024651.2-201ENST00000562480 2098 ntBASIC5.31□□□□□ -1.56
SFTPBP07988 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
SFTPBP07988 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SFTPBP07988 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
SFTPBP07988 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 U3.23-201ENST00000391132 200 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 AL121835.1-201ENST00000404250 354 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 RN7SKP151-201ENST00000410230 316 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 RCC2P2-201ENST00000422174 918 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 OSTCP4-201ENST00000424397 449 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 RPS7P14-201ENST00000426405 583 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 GAPDHP75-201ENST00000433910 943 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 AC016908.1-201ENST00000442571 1219 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 AL157385.1-201ENST00000446973 268 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 MORF4-201ENST00000447135 971 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.3□□□□□ -1.56
SFTPBP07988 AC093166.3-201ENST00000448785 303 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 RPL7L1P3-201ENST00000455249 689 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 AC073594.1-201ENST00000462065 364 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.3□□□□□ -1.56
SFTPBP07988 MTND3P6-201ENST00000485242 339 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 RNU6-551P-201ENST00000516661 103 ntBASIC5.3□□□□□ -1.56
SFTPBP07988 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SFTPBP07988 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.3□□□□□ -1.56
SFTPBP07988 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms