Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.93□□□□□ -1.46
LDLRP01130 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LDLRP01130 PSMC1P6-201ENST00000477233 1319 ntBASIC5.93□□□□□ -1.46
LDLRP01130 SAMMSON-210ENST00000641260 1308 ntBASIC5.93□□□□□ -1.46
LDLRP01130 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.93□□□□□ -1.46
LDLRP01130 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LDLRP01130 AC092070.2-203ENST00000598377 3644 ntBASIC5.93□□□□□ -1.46
LDLRP01130 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LDLRP01130 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LDLRP01130 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LDLRP01130 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 AC025470.1-201ENST00000510053 2032 ntBASIC5.92□□□□□ -1.46
LDLRP01130 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 RARSP1-201ENST00000542842 1418 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AL359955.1-201ENST00000455242 3275 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 MRPS6P2-201ENST00000381143 370 ntBASIC5.92□□□□□ -1.46
LDLRP01130 MIR433-201ENST00000384837 93 ntBASIC5.92□□□□□ -1.46
LDLRP01130 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 NPM1P10-201ENST00000398310 865 ntBASIC5.92□□□□□ -1.46
LDLRP01130 RN7SKP17-201ENST00000411242 351 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 AC079355.1-201ENST00000421770 223 ntBASIC5.92□□□□□ -1.46
LDLRP01130 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 PNKDP1-201ENST00000435914 430 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AC073109.1-201ENST00000445066 978 ntBASIC5.92□□□□□ -1.46
LDLRP01130 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 AC009963.4-201ENST00000448535 339 ntBASIC5.92□□□□□ -1.46
LDLRP01130 RPS4XP14-201ENST00000493072 781 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.92□□□□□ -1.46
LDLRP01130 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.92□□□□□ -1.46
LDLRP01130 SCARNA5-201ENST00000516201 276 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.92□□□□□ -1.46
LDLRP01130 AC133552.4-201ENST00000576103 676 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AC090616.1-201ENST00000583895 447 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 SNORA35B-201ENST00000607417 129 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 AC003992.1-201ENST00000635364 557 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AP000550.3-201ENST00000637734 379 ntBASIC5.92□□□□□ -1.46
LDLRP01130 OR7E91P-202ENST00000642062 1198 ntBASIC5.92□□□□□ -1.46
LDLRP01130 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.92□□□□□ -1.46
LDLRP01130 GUCY1B2-204ENST00000531898 1979 ntBASIC5.92□□□□□ -1.46
LDLRP01130 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 LYARP1-201ENST00000436977 1501 ntBASIC5.92□□□□□ -1.46
LDLRP01130 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.92□□□□□ -1.46
LDLRP01130 KYNUP3-201ENST00000574386 1341 ntBASIC5.92□□□□□ -1.46
LDLRP01130 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LDLRP01130 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
LDLRP01130 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.91□□□□□ -1.46
LDLRP01130 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 AL121839.2-201ENST00000565058 6943 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
LDLRP01130 WDR95P-201ENST00000425638 1542 ntBASIC5.91□□□□□ -1.46
LDLRP01130 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LDLRP01130 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
LDLRP01130 SNORD1C-201ENST00000363315 78 ntBASIC5.91□□□□□ -1.46
LDLRP01130 RNA5SP510-201ENST00000364697 99 ntBASIC5.91□□□□□ -1.46
LDLRP01130 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
LDLRP01130 CDY17P-201ENST00000414121 1282 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.91□□□□□ -1.46
LDLRP01130 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 GAPDHP33-201ENST00000443168 1013 ntBASIC5.91□□□□□ -1.46
LDLRP01130 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 OR2L9P-201ENST00000444456 913 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.91□□□□□ -1.46
LDLRP01130 RBBP4P1-201ENST00000502424 1276 ntBASIC5.91□□□□□ -1.46
LDLRP01130 LSM3P4-201ENST00000502948 309 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.91□□□□□ -1.46
LDLRP01130 CYCSP38-201ENST00000559840 322 ntBASIC5.91□□□□□ -1.46
LDLRP01130 NPM1P42-201ENST00000560329 862 ntBASIC5.91□□□□□ -1.46
LDLRP01130 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LDLRP01130 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
LDLRP01130 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms