Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 AC104964.3-201ENST00000606115 2860 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 AC140479.2-201ENST00000421567 3130 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SDCBPO00560 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 AC130360.2-201ENST00000533477 1556 ntBASIC4.95□□□□□ -1.62
SDCBPO00560 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SDCBPO00560 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SDCBPO00560 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 ADAM24P-201ENST00000398655 2101 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SDCBPO00560 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SDCBPO00560 RBMY1HP-201ENST00000382759 1389 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SDCBPO00560 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SDCBPO00560 RNA5SP211-201ENST00000365516 117 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 RPL11P3-201ENST00000395256 523 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 RN7SKP108-201ENST00000411367 328 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL359885.1-201ENST00000415786 903 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL354766.1-201ENST00000423396 542 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SDCBPO00560 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 MTND2P40-201ENST00000436718 841 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 HMGB1P7-201ENST00000450921 612 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.94□□□□□ -1.62
SDCBPO00560 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC084824.2-201ENST00000548906 345 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AC023310.2-201ENST00000553844 547 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 ARGFXP2-201ENST00000579304 949 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 MIR5010-201ENST00000582846 120 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 AL353729.2-201ENST00000605859 1249 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC022400.9-201ENST00000623633 273 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.94□□□□□ -1.62
SDCBPO00560 AC018765.1-201ENST00000623357 3446 ntBASIC4.94□□□□□ -1.62
SDCBPO00560 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.94□□□□□ -1.62
SDCBPO00560 AP004607.3-201ENST00000530354 3915 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.93□□□□□ -1.62
SDCBPO00560 AL031123.3-201ENST00000623345 1837 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SDCBPO00560 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.93□□□□□ -1.62
SDCBPO00560 AL035422.1-201ENST00000414193 397 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AL158827.1-201ENST00000416300 391 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AC099677.3-201ENST00000427081 395 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 GAPDHP59-201ENST00000435908 267 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AL590399.4-201ENST00000436561 601 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 AC073476.1-201ENST00000452854 407 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 PPIAP7-201ENST00000454070 489 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AC098818.1-201ENST00000478593 252 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AC006539.1-201ENST00000481419 501 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 RN7SL568P-201ENST00000493069 298 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 AP000620.1-201ENST00000527147 504 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 AL163952.1-202ENST00000569625 600 ntBASIC4.93□□□□□ -1.62
SDCBPO00560 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.93□□□□□ -1.62
SDCBPO00560 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SDCBPO00560 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.93□□□□□ -1.62
SDCBPO00560 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.93□□□□□ -1.62
SDCBPO00560 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms