Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RPL23AP17-201ENST00000401064 499 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 H3F3BP1-201ENST00000440551 403 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 RPL6P30-201ENST00000443382 862 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC068228.1-201ENST00000461723 211 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC115989.2-201ENST00000578640 563 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AP005119.1-201ENST00000580956 292 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AC092266.1-201ENST00000610958 165 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 AL031658.2-201ENST00000616850 651 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 MIR1910-201ENST00000636955 80 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 ZNF101P1-201ENST00000435701 1720 ntBASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4BQ9Y4P1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 BX284613.1-201ENST00000452221 1641 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC093225.1-201ENST00000506867 1408 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 NAMPTP1-201ENST00000440465 2514 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 NACAP7-201ENST00000407371 609 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 SNRPEP6-201ENST00000407465 277 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 MYL6P5-201ENST00000412707 459 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC115283.1-201ENST00000427353 400 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 OR6C71P-201ENST00000432580 913 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL365220.1-201ENST00000432923 399 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC110602.1-201ENST00000437414 318 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 DNAJC19P5-201ENST00000443295 316 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 CUBNP2-201ENST00000443534 1139 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 REG1CP-206ENST00000447469 496 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 RBBP4P1-201ENST00000502424 1276 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 PRMT5P1-201ENST00000514351 598 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC110056.1-201ENST00000525759 911 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC244502.2-201ENST00000543361 851 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC234775.3-201ENST00000564612 656 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC069234.4-201ENST00000621276 412 ntBASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4BQ9Y4P1 AC012078.1-201ENST00000405035 1646 ntBASIC5.66□□□□□ -1.5
ATG4BQ9Y4P1 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms