Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OR11I1P-201ENST00000486033 954 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC018645.1-201ENST00000505003 109 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RNU6-513P-201ENST00000516104 104 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 Y_RNA.710-201ENST00000516975 110 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 OR4A43P-201ENST00000532938 908 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 FCGR1CP-201ENST00000579737 1127 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC119403.2-201ENST00000590960 598 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL513327.3-201ENST00000602618 469 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC008555.7-201ENST00000605008 583 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL122125.1-201ENST00000616999 600 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL355974.3-201ENST00000617383 467 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AL355480.4-201ENST00000626823 69 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 OR5G5P-204ENST00000627642 621 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC099654.6-201ENST00000636487 512 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC093909.5-201ENST00000621839 1799 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 AC130304.1-201ENST00000622942 2385 ntBASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KCNIP3Q9Y2W7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC007342.5-201ENST00000571340 2142 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SKP74-201ENST00000362849 309 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RNU105B-201ENST00000364478 208 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL589994.1-201ENST00000404962 340 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RNA5SP431-201ENST00000410312 120 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC002524.1-201ENST00000411687 547 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 SOCS5P1-201ENST00000440415 949 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL663074.2-201ENST00000440621 479 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL845321.1-201ENST00000444603 348 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RPL5P15-201ENST00000475870 897 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 OR7E157P-201ENST00000494376 911 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 OR7E99P-201ENST00000505750 922 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RNA5SP418-201ENST00000515951 117 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 Vault.2-201ENST00000516519 98 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 OR56A7P-201ENST00000524865 941 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RBMS2P1-201ENST00000525031 1226 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL121594.2-201ENST00000541658 472 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC008055.1-201ENST00000547032 609 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC023080.1-201ENST00000551663 931 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 RN7SL475P-201ENST00000583379 298 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 WBP1LP11-201ENST00000586141 328 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL713998.2-201ENST00000604538 1198 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AL008582.1-201ENST00000609612 442 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC096586.2-201ENST00000610260 441 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 AC104260.2-201ENST00000623551 3497 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 SAMMSON-213ENST00000641336 1521 ntBASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.97□□□□□ -1.61
KCNIP3Q9Y2W7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
KCNIP3Q9Y2W7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms