Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC009963.3-201ENST00000458090 486 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC083795.1-201ENST00000491760 320 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 PRMT5P1-201ENST00000514351 598 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC009879.1-201ENST00000520029 839 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL845552.1-201ENST00000556820 323 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC026826.3-201ENST00000561747 158 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 TXNP4-201ENST00000575018 310 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RNU4ATAC-201ENST00000580972 127 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC124916.2-201ENST00000604416 224 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL645933.2-201ENST00000606743 1207 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL136097.3-201ENST00000611097 505 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC005618.4-201ENST00000625053 554 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 BX284613.1-201ENST00000452221 1641 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AC139426.3-201ENST00000605648 2059 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AL158152.1-201ENST00000602652 1435 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRAPPC4Q9Y296 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.46□□□□□ -1.53
TRAPPC4Q9Y296 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RNA5SP375-201ENST00000362975 119 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RNA5SP187-201ENST00000384400 119 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 GCNT1P4-201ENST00000404096 329 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC245096.1-201ENST00000413104 546 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 METTL15P3-201ENST00000415522 1221 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 HMGN2P27-201ENST00000427352 270 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AL136231.1-201ENST00000429407 730 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC138761.5-201ENST00000433967 325 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RPL6P30-201ENST00000443382 862 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC092865.4-201ENST00000477936 615 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC111000.6-201ENST00000514471 709 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 DPPA3P2-202ENST00000557188 1219 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 ZNF322P1-201ENST00000568013 1209 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 MIR4502-201ENST00000580432 81 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AL583832.1-201ENST00000603227 784 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC018690.1-201ENST00000608144 626 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC097641.3-201ENST00000613523 464 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RFPL4AP6-201ENST00000616792 846 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AL512652.1-201ENST00000619006 500 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC096708.4-201ENST00000620563 552 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 RPS2P45-201ENST00000469997 2057 ntBASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TRAPPC4Q9Y296 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AP005435.3-201ENST00000531260 3198 ntBASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRAPPC4Q9Y296 RBMY1HP-201ENST00000382759 1389 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms