Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC092821.2-201ENST00000545710 2042 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 HCG18-244ENST00000602516 2890 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC012213.2-201ENST00000562917 4597 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 RNA5SP232-201ENST00000364144 119 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 RN7SKP47-201ENST00000365347 328 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 RN7SKP62-201ENST00000384539 329 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL590762.1-201ENST00000391782 432 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 MIR1204-201ENST00000408388 67 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 Z93019.1-201ENST00000416450 973 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 NIPA2P1-201ENST00000426223 976 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC090018.1-201ENST00000434369 367 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 ARMC4P1-201ENST00000438905 707 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 NPM1P33-201ENST00000438918 872 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 SNRPBP1-201ENST00000443634 282 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 BMS1P10-201ENST00000443754 1120 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC044797.1-201ENST00000445744 679 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC097359.1-201ENST00000447946 463 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 RPL23AP28-201ENST00000448062 470 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL034399.1-201ENST00000451535 380 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 TRBV8-1-201ENST00000481590 279 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 RPS12P31-201ENST00000491419 398 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 MTND5P13-201ENST00000513046 1079 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 MTND2P26-201ENST00000528255 1029 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 VN1R81P-201ENST00000602085 372 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AL035410.2-201ENST00000604963 864 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 AC116165.2-201ENST00000616705 206 ntBASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SYNGAP1Q96PV0 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 PRNCR1-201ENST00000635449 12727 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC092725.2-201ENST00000567658 1389 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 RNU6-207P-201ENST00000384137 107 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL008987.1-201ENST00000415528 237 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL139158.1-201ENST00000424719 340 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL645939.3-201ENST00000435408 225 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 COL11A2P1-205ENST00000441798 676 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC074386.1-201ENST00000476560 767 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 RN7SL177P-201ENST00000476596 299 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC111000.2-201ENST00000507775 550 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC093752.1-206ENST00000511823 336 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC124891.1-201ENST00000536322 519 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 DHFRP1-201ENST00000579682 559 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 MTATP6P3-201ENST00000581686 676 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC091133.5-201ENST00000603088 301 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 AC002069.2-201ENST00000603580 883 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 HMGB1P51-201ENST00000605166 638 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 TUSC7.1-201ENST00000610969 165 ntBASIC7.73□□□□□ -1.17
SYNGAP1Q96PV0 FRG1DP-201ENST00000635586 771 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms