Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AL136131.3-201ENST00000607600 188 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC010168.2-201ENST00000562691 5428 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC106872.5-201ENST00000508856 1416 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC073342.2-201ENST00000595842 1800 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CCDC7Q96M83 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AL513325.1-201ENST00000417716 1034 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC245884.2-201ENST00000426257 404 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 RPL36AP39-201ENST00000445859 318 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC091078.2-201ENST00000557145 559 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 NPM1P42-201ENST00000560329 862 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 GARSP1-201ENST00000570895 719 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC087269.2-201ENST00000641764 975 ntBASIC8.22□□□□□ -1.09
CCDC7Q96M83 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.22□□□□□ -1.09
CCDC7Q96M83 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.21□□□□□ -1.09
CCDC7Q96M83 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.21□□□□□ -1.09
CCDC7Q96M83 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
CCDC7Q96M83 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 MIR1178-201ENST00000408396 91 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 AC245060.4-201ENST00000413293 1121 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 SUMO2P3-201ENST00000438311 288 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 PFN1P6-201ENST00000476786 399 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 OR4A42P-201ENST00000531397 938 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 AC016180.1-201ENST00000567945 403 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 PRELID3BP3-201ENST00000584963 545 ntBASIC8.21□□□□□ -1.1
CCDC7Q96M83 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CCDC7Q96M83 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.21□□□□□ -1.1
CCDC7Q96M83 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
CCDC7Q96M83 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.2□□□□□ -1.1
CCDC7Q96M83 CYP2AC1P-201ENST00000407830 1173 ntBASIC8.2□□□□□ -1.1
CCDC7Q96M83 AC093155.2-201ENST00000420734 937 ntBASIC8.2□□□□□ -1.1
CCDC7Q96M83 BX323845.3-201ENST00000428215 527 ntBASIC8.2□□□□□ -1.1
CCDC7Q96M83 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 KRT8P51-201ENST00000438938 274 ntBASIC8.2□□□□□ -1.1
CCDC7Q96M83 AL122020.1-201ENST00000472287 459 ntBASIC8.2□□□□□ -1.1
CCDC7Q96M83 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CCDC7Q96M83 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC7Q96M83 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC7Q96M83 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.2□□□□□ -1.1
CCDC7Q96M83 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms