Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC009712.1-201ENST00000564938 316 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 MTATP6P2-201ENST00000603319 678 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 KATNBL1P5-201ENST00000605015 517 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC141002.1-201ENST00000607025 279 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 CR589904.2-201ENST00000612533 440 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC021422.1-201ENST00000621212 473 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AP003485.1-201ENST00000625093 753 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC110792.3-201ENST00000595906 1614 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 RNA5SP485-201ENST00000365053 119 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 YWHAZP4-201ENST00000392459 708 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ATP5F1P6-201ENST00000402768 767 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 PTCD2P2-201ENST00000415579 1095 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 MTCO2P17-201ENST00000424336 677 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC094019.1-201ENST00000434678 472 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ARMC4P1-201ENST00000438905 707 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AL390879.1-201ENST00000439143 386 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC092601.1-201ENST00000444526 383 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC115223.1-201ENST00000466377 870 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 RPS7P11-201ENST00000484240 586 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC093816.1-201ENST00000515076 913 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC034236.3-201ENST00000605999 461 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AL450270.1-201ENST00000606160 391 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AL355802.4-201ENST00000607635 548 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 MIR6883-201ENST00000614952 78 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AP000770.2-201ENST00000623694 100 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC011416.1-201ENST00000514947 1732 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC092070.2-203ENST00000598377 3644 ntBASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4AQ8WYN0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC024651.2-201ENST00000562480 2098 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL161756.3-201ENST00000641216 2071 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC217777.1-201ENST00000570034 1471 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 FUNDC2P3-201ENST00000334716 533 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL121977.1-201ENST00000401636 979 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms