Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 IGLV3-24-201ENST00000517477 197 ntBASIC8.98□□□□□ -0.97
VPS8Q8N3P4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 NPM1P42-201ENST00000560329 862 ntBASIC8.98□□□□□ -0.97
VPS8Q8N3P4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 SNORD95-201ENST00000579879 68 ntBASIC8.98□□□□□ -0.97
VPS8Q8N3P4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 MIR6729-201ENST00000618194 65 ntBASIC8.98□□□□□ -0.97
VPS8Q8N3P4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 AC079355.1-201ENST00000421770 223 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AL450023.1-201ENST00000450868 751 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 NANOGP3-201ENST00000605855 286 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 SNORA70.9-201ENST00000384370 135 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 RPS6P23-201ENST00000413224 722 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC005297.1-201ENST00000444765 862 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC093719.1-201ENST00000480427 441 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 DUTP7-201ENST00000507982 486 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 MIR4311-201ENST00000580794 100 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.97□□□□□ -0.97
VPS8Q8N3P4 AC079414.3-201ENST00000612986 1090 ntBASIC8.97□□□□□ -0.97
VPS8Q8N3P4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 AC009962.1-201ENST00000567327 3813 ntBASIC8.96□□□□□ -0.97
VPS8Q8N3P4 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
VPS8Q8N3P4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AC006206.1-201ENST00000544842 3387 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 RNA5SP132-201ENST00000364725 118 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 GNG5P2-201ENST00000372054 207 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AC005522.1-201ENST00000395416 346 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 GABARAPL3-201ENST00000412799 354 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 RN7SL284P-201ENST00000498823 275 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 HIRAP1-201ENST00000605318 787 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AC025574.2-201ENST00000615621 514 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 AP003789.1-201ENST00000617737 605 ntBASIC8.96□□□□□ -0.98
VPS8Q8N3P4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 AL049634.1-201ENST00000453770 1720 ntBASIC8.95□□□□□ -0.98
VPS8Q8N3P4 OR6E1P-201ENST00000414424 923 ntBASIC8.95□□□□□ -0.98
VPS8Q8N3P4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 OR7A1P-201ENST00000601206 970 ntBASIC8.95□□□□□ -0.98
VPS8Q8N3P4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.95□□□□□ -0.98
VPS8Q8N3P4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms