Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AL133481.2-203ENST00000607558 139 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC073592.6-201ENST00000624271 415 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 AC069542.2-201ENST00000624816 216 ntBASIC5.65□□□□□ -1.5
HMGCS1Q01581 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCS1Q01581 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCS1Q01581 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCS1Q01581 MFSD8-219ENST00000641228 2559 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 AP004607.3-201ENST00000530354 3915 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 AC004076.2-201ENST00000620532 3323 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMGCS1Q01581 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.65□□□□□ -1.51
HMGCS1Q01581 AL354854.1-201ENST00000455940 1363 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMGCS1Q01581 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCS1Q01581 AC087516.1-201ENST00000561236 2428 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 AC018628.1-201ENST00000624147 3819 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
HMGCS1Q01581 AC012254.3-201ENST00000591183 2117 ntBASIC5.65□□□□□ -1.51
HMGCS1Q01581 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCS1Q01581 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMGCS1Q01581 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 TRGV5P-201ENST00000419915 354 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC096775.1-201ENST00000437724 448 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC006539.1-201ENST00000481419 501 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC011853.1-201ENST00000518911 454 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC009879.1-201ENST00000520029 839 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AP003080.1-202ENST00000526526 915 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 AL513327.3-201ENST00000602618 469 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC018690.1-201ENST00000608144 626 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC004801.6-201ENST00000616571 978 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC096708.4-201ENST00000620563 552 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 AC073593.1-201ENST00000624500 411 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 OR11H2-202ENST00000641517 1085 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 FBXL21-201ENST00000297158 1305 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCS1Q01581 MFSD8-239ENST00000641590 2479 ntBASIC5.64□□□□□ -1.51
HMGCS1Q01581 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCS1Q01581 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC139426.3-201ENST00000605648 2059 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 RN7SKP78-201ENST00000364711 318 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 MIR130B-202ENST00000385018 82 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AL096711.1-201ENST00000404780 554 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 RNA5SP431-201ENST00000410312 120 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 NME1P1-201ENST00000420914 382 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 BMS1P10-201ENST00000443754 1120 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AL157777.1-201ENST00000468100 304 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 RN7SL170P-201ENST00000487098 295 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 RPL37P23-201ENST00000492641 294 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC006512.2-201ENST00000543250 486 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC092332.1-201ENST00000563684 829 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC002310.3-201ENST00000569728 723 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms