Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LHX1P48742 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LHX1P48742 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 AL121835.1-201ENST00000404250 354 ntBASIC6.29□□□□□ -1.4
LHX1P48742 EEF1B2P8-201ENST00000414101 671 ntBASIC6.29□□□□□ -1.4
LHX1P48742 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 BX323845.3-201ENST00000428215 527 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AC126120.1-201ENST00000431082 470 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AL663074.2-201ENST00000440621 479 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AL445665.1-202ENST00000452436 324 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AC016724.1-201ENST00000453215 421 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AC007998.1-201ENST00000474156 672 ntBASIC6.29□□□□□ -1.4
LHX1P48742 PSMA2P2-201ENST00000504319 686 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.29□□□□□ -1.4
LHX1P48742 SNORD46.2-201ENST00000516021 102 ntBASIC6.29□□□□□ -1.4
LHX1P48742 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AL049779.3-201ENST00000557141 606 ntBASIC6.29□□□□□ -1.4
LHX1P48742 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.29□□□□□ -1.4
LHX1P48742 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 AC027243.2-201ENST00000602530 724 ntBASIC6.29□□□□□ -1.4
LHX1P48742 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LHX1P48742 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LHX1P48742 AL731532.1-201ENST00000623972 4236 ntBASIC6.29□□□□□ -1.4
LHX1P48742 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.29□□□□□ -1.4
LHX1P48742 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LHX1P48742 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.28□□□□□ -1.4
LHX1P48742 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
LHX1P48742 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LHX1P48742 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.28□□□□□ -1.4
LHX1P48742 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LHX1P48742 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.28□□□□□ -1.4
LHX1P48742 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.28□□□□□ -1.4
LHX1P48742 AC245060.4-201ENST00000413293 1121 ntBASIC6.28□□□□□ -1.4
LHX1P48742 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 DEFA9P-201ENST00000433042 285 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.28□□□□□ -1.4
LHX1P48742 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.28□□□□□ -1.4
LHX1P48742 AC073109.1-201ENST00000445066 978 ntBASIC6.28□□□□□ -1.4
LHX1P48742 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LHX1P48742 MTND4LP12-201ENST00000448237 295 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.28□□□□□ -1.4
LHX1P48742 AL445687.2-201ENST00000458156 728 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AL603882.1-201ENST00000463059 681 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.28□□□□□ -1.4
LHX1P48742 RN7SKP288-201ENST00000516227 268 ntBASIC6.28□□□□□ -1.4
LHX1P48742 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 AC022826.1-201ENST00000519383 805 ntBASIC6.28□□□□□ -1.4
LHX1P48742 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.28□□□□□ -1.4
LHX1P48742 HMGN2P36-201ENST00000529541 409 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 AC091078.2-201ENST00000557145 559 ntBASIC6.28□□□□□ -1.4
LHX1P48742 TXNP4-201ENST00000575018 310 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AL049840.6-201ENST00000604583 345 ntBASIC6.28□□□□□ -1.4
LHX1P48742 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.28□□□□□ -1.4
LHX1P48742 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 AC069542.2-201ENST00000624816 216 ntBASIC6.28□□□□□ -1.4
LHX1P48742 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.28□□□□□ -1.4
LHX1P48742 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LHX1P48742 NEPNP-201ENST00000404786 1371 ntBASIC6.28□□□□□ -1.4
LHX1P48742 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LHX1P48742 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.27□□□□□ -1.4
LHX1P48742 AC091305.2-201ENST00000624049 1576 ntBASIC6.27□□□□□ -1.41
LHX1P48742 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.27□□□□□ -1.41
LHX1P48742 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.27□□□□□ -1.41
LHX1P48742 AC020656.2-201ENST00000613291 5309 ntBASIC6.27□□□□□ -1.41
LHX1P48742 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 AC106872.5-201ENST00000508856 1416 ntBASIC6.27□□□□□ -1.41
LHX1P48742 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
LHX1P48742 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
LHX1P48742 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms