Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 OR2AT2P-201ENST00000413438 905 ntBASIC6.49□□□□□ -1.37
RB1P06400 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 AC017078.1-201ENST00000416146 368 ntBASIC6.49□□□□□ -1.37
RB1P06400 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 AL355433.1-201ENST00000422804 300 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.49□□□□□ -1.37
RB1P06400 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 AC092824.1-201ENST00000483524 576 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 AC110056.1-201ENST00000525759 911 ntBASIC6.49□□□□□ -1.37
RB1P06400 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 AC092865.1-201ENST00000544395 1023 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.49□□□□□ -1.37
RB1P06400 AC018558.5-201ENST00000565840 952 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC090953.1-201ENST00000604305 1092 ntBASIC6.49□□□□□ -1.37
RB1P06400 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.49□□□□□ -1.37
RB1P06400 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.49□□□□□ -1.37
RB1P06400 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 MTCO1P8-201ENST00000416914 1523 ntBASIC6.49□□□□□ -1.37
RB1P06400 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RB1P06400 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.49□□□□□ -1.37
RB1P06400 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 MAPK10-287ENST00000641217 3037 ntBASIC6.49□□□□□ -1.37
RB1P06400 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
RB1P06400 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.49□□□□□ -1.37
RB1P06400 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.49□□□□□ -1.37
RB1P06400 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RB1P06400 AC009120.2-204ENST00000621548 2032 ntBASIC6.49□□□□□ -1.37
RB1P06400 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 PDZK1P1-202ENST00000425209 1350 ntBASIC6.48□□□□□ -1.37
RB1P06400 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 RNA5SP46-201ENST00000362370 120 ntBASIC6.48□□□□□ -1.37
RB1P06400 MIR937-201ENST00000401271 86 ntBASIC6.48□□□□□ -1.37
RB1P06400 BMS1P17-202ENST00000416720 316 ntBASIC6.48□□□□□ -1.37
RB1P06400 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.48□□□□□ -1.37
RB1P06400 AC016027.4-201ENST00000450866 277 ntBASIC6.48□□□□□ -1.37
RB1P06400 LRRC37A14P-201ENST00000452297 462 ntBASIC6.48□□□□□ -1.37
RB1P06400 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.48□□□□□ -1.37
RB1P06400 AC083795.1-201ENST00000491760 320 ntBASIC6.48□□□□□ -1.37
RB1P06400 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.48□□□□□ -1.37
RB1P06400 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 RNU6-551P-201ENST00000516661 103 ntBASIC6.48□□□□□ -1.37
RB1P06400 RNA5SP34-201ENST00000516887 130 ntBASIC6.48□□□□□ -1.37
RB1P06400 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 OR56A7P-201ENST00000524865 941 ntBASIC6.48□□□□□ -1.37
RB1P06400 AP004607.6-201ENST00000525033 1202 ntBASIC6.48□□□□□ -1.37
RB1P06400 RPA2P3-201ENST00000533268 770 ntBASIC6.48□□□□□ -1.37
RB1P06400 AC006530.1-201ENST00000555980 571 ntBASIC6.48□□□□□ -1.37
RB1P06400 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.48□□□□□ -1.37
RB1P06400 FAM27E4-201ENST00000605259 342 ntBASIC6.48□□□□□ -1.37
RB1P06400 AC097467.4-201ENST00000605504 141 ntBASIC6.48□□□□□ -1.37
RB1P06400 RPL12P48-201ENST00000605620 304 ntBASIC6.48□□□□□ -1.37
RB1P06400 AC141002.1-201ENST00000607025 279 ntBASIC6.48□□□□□ -1.37
RB1P06400 SNORA35B-201ENST00000607417 129 ntBASIC6.48□□□□□ -1.37
RB1P06400 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
RB1P06400 AC025809.2-201ENST00000625085 1802 ntBASIC6.48□□□□□ -1.37
RB1P06400 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.48□□□□□ -1.37
RB1P06400 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RB1P06400 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 AL136531.3-201ENST00000624378 3658 ntBASIC6.47□□□□□ -1.37
RB1P06400 MTCO1P22-201ENST00000604619 1360 ntBASIC6.47□□□□□ -1.37
RB1P06400 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RB1P06400 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RB1P06400 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RB1P06400 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RB1P06400 OR11H13P-201ENST00000359695 979 ntBASIC6.47□□□□□ -1.37
RB1P06400 RN7SKP162-201ENST00000363605 345 ntBASIC6.47□□□□□ -1.37
RB1P06400 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.47□□□□□ -1.37
RB1P06400 RPS15AP30-201ENST00000420976 390 ntBASIC6.47□□□□□ -1.37
RB1P06400 KIF4CP-201ENST00000422742 1279 ntBASIC6.47□□□□□ -1.37
RB1P06400 LDHAP2-201ENST00000437325 985 ntBASIC6.47□□□□□ -1.37
RB1P06400 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms