Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SLC28A1O00337 AL929601.4-201ENST00000613011 1341 ntBASIC5.73□□□□□ -1.49
SLC28A1O00337 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SLC28A1O00337 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SLC28A1O00337 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 GNL2P1-201ENST00000451274 2190 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AL513548.1-201ENST00000562904 1724 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 RNU1-134P-201ENST00000362935 165 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 NACAP7-201ENST00000407371 609 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 RNA5SP198-201ENST00000410376 127 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 CRIP1P1-201ENST00000427567 185 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AC096775.1-201ENST00000437724 448 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AL663074.2-201ENST00000440621 479 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 MTND4LP12-201ENST00000448237 295 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 FRG2FP-204ENST00000453982 852 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC004890.1-201ENST00000461005 181 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 TRBV8-1-201ENST00000481590 279 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC110056.1-201ENST00000525759 911 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 MIR6774-201ENST00000614651 70 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 AC012676.3-201ENST00000614983 479 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC007603.3-201ENST00000636915 979 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SLC28A1O00337 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC137056.2-201ENST00000624055 1958 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 MTCO1P28-201ENST00000574177 1528 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.72□□□□□ -1.49
SLC28A1O00337 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
SLC28A1O00337 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SLC28A1O00337 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SLC28A1O00337 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SLC28A1O00337 AC140134.1-201ENST00000511830 3544 ntBASIC5.71□□□□□ -1.49
SLC28A1O00337 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
SLC28A1O00337 AC232271.1-201ENST00000602455 2715 ntBASIC5.71□□□□□ -1.49
SLC28A1O00337 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SLC28A1O00337 RBMY1HP-201ENST00000382759 1389 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SLC28A1O00337 MIR188-201ENST00000385034 86 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AL589994.1-201ENST00000404962 340 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 SNRPEP6-201ENST00000407465 277 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 RN7SKP38-201ENST00000410782 309 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC099782.1-201ENST00000425889 474 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AC064862.5-201ENST00000440618 334 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.71□□□□□ -1.5
SLC28A1O00337 RPL5P10-201ENST00000445207 894 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 SEPT14P1-201ENST00000458703 648 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AP000926.3-201ENST00000497201 299 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC108103.1-201ENST00000511286 446 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.71□□□□□ -1.5
SLC28A1O00337 MIR2117-201ENST00000516780 80 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 CASP1P2-201ENST00000526830 1258 ntBASIC5.71□□□□□ -1.5
SLC28A1O00337 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.71□□□□□ -1.5
SLC28A1O00337 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.71□□□□□ -1.5
SLC28A1O00337 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC28A1O00337 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms