Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1h3Q9Z0Y9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nr1h3Q9Z0Y9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.39■□□□□ 0.54
Nr1h3Q9Z0Y9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.39■□□□□ 0.53
Nr1h3Q9Z0Y9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm37722-201ENSMUST00000193757 208 ntBASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm45328-201ENSMUST00000210942 917 ntBASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.37■□□□□ 0.53
Nr1h3Q9Z0Y9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Mir770-201ENSMUST00000103252 94 ntBASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr1h3Q9Z0Y9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr1h3Q9Z0Y9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms