Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
Mbd3l1Q9D9H3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Mbd3l1Q9D9H3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Mbd3l1Q9D9H3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Mbd3l1Q9D9H3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Mbd3l1Q9D9H3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mbd3l1Q9D9H3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms