Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clca1Q9D7Z6 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Gm11643-201ENSMUST00000119578 864 ntBASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Timm23-208ENSMUST00000226683 750 ntBASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clca1Q9D7Z6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Gm13836-201ENSMUST00000121159 501 ntBASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Clca1Q9D7Z6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Clca1Q9D7Z6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Clca1Q9D7Z6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Clca1Q9D7Z6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.07■□□□□ 0.32
Clca1Q9D7Z6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Clca1Q9D7Z6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms