Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4aQ9D3I8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Gm22325-201ENSMUST00000158904 308 ntBASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4aQ9D3I8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhox4aQ9D3I8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rhox4aQ9D3I8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gm13146-201ENSMUST00000118508 780 ntBASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rhox4aQ9D3I8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rhox4aQ9D3I8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms